Sodium in PDB, part 53 (files: 2081-2120),
PDB 3ajn-3b1q
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 2081-2120 (PDB 3ajn-3b1q).
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3ajn (Na: 1) - Structural Basis of Glycine Amide on Suppression of Protein Aggregation By High Resolution X-Ray Analysis
Other atoms:
Cl (2);
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3akf (Na: 1) - Crystal Structure of Exo-1,5-Alpha-L-Arabinofuranosidase
Other atoms:
Cl (1);
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3akg (Na: 1) - Crystal Structure of Exo-1,5-Alpha-L-Arabinofuranosidase Complexed with Alpha-1,5-L-Arabinofuranobiose
Other atoms:
Cl (1);
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3akh (Na: 1) - Crystal Structure of Exo-1,5-Alpha-L-Arabinofuranosidase Complexed with Alpha-1,5-L-Arabinofuranotriose
Other atoms:
Cl (1);
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3aki (Na: 1) - Crystal Structure of Exo-1,5-Alpha-L-Arabinofuranosidase Complexed with Alpha-L-Arabinofuranosyl Azido
Other atoms:
Cl (1);
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3akr (Na: 2) - Crystal Structure of Xylanase From Trichoderma Longibrachiatum
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3aks (Na: 1) - Crystal Structure of Xylanase From Trichoderma Longibrachiatum
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3amo (Na: 2) - Time-Resolved X-Ray Crystal Structure Analysis of Enzymatic Reaction of Copper Amine Oxidase From Arthrobacter Globiformis
Other atoms:
Cu (2);
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3ao0 (Na: 1) - Crystal Structure of Ethanolamine Ammonia-Lyase From Escherichia Coli Complexed with Cn-Cbl and (S)-2-Amino-1-Propanol
Other atoms:
Co (2);
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3ar2 (Na: 1) - Calcium Pump Crystal Structure with Bound Amppcp and CA2+
Other atoms:
Ca (3);
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3ar3 (Na: 1) - Calcium Pump Crystal Structure with Bound Adp and Tg
Other atoms:
Mg (2);
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3ar4 (Na: 1) - Calcium Pump Crystal Structure with Bound Atp and Tg in the Absence of CA2+
Other atoms:
Mg (2);
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3ar5 (Na: 1) - Calcium Pump Crystal Structure with Bound Tnp-Amp and Tg
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3ar6 (Na: 1) - Calcium Pump Crystal Structure with Bound Tnp-Adp and Tg in the Absence of Calcium
Other atoms:
Mg (1);
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3ar7 (Na: 1) - Calcium Pump Crystal Structure with Bound Tnp-Atp and Tg in the Absence of CA2+
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3ar8 (Na: 1) - Calcium Pump Crystal Structure with Bound ALF4, Tnp-Amp and Tg
Other atoms:
F (4);
Mg (1);
Al (1);
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3ar9 (Na: 1) - Calcium Pump Crystal Structure with Bound BEF3, Tnp-Amp and Tg in the Absence of Calcium
Other atoms:
F (3);
Mg (1);
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3asn (Na: 2) - Bovine Heart Cytochrome C Oxidase in the Fully Oxidized State Measured at 1.7470 Angstrom Wavelength
Other atoms:
Cu (6);
Fe (4);
Zn (2);
Mg (2);
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3aso (Na: 2) - Bovine Heart Cytochrome C Oxidase in the Fully Oxidized State Measured at 0.9 Angstrom Wavelength
Other atoms:
Zn (2);
Mg (2);
Cu (6);
Fe (4);
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3asp (Na: 2) - Crystal Structure of P Domain From Norovirus FUNABASHI258 Stain in the Complex with A-Antigen
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3asq (Na: 2) - Crystal Structure of P Domain From Norovirus FUNABASHI258 Stain in the Complex with H-Antigen
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3asr (Na: 2) - Crystal Structure of P Domain From Norovirus FUNABASHI258 Stain in the Complex with Lewis-A
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3ass (Na: 2) - Crystal Structure of P Domain From Norovirus FUNABASHI258 Stain in the Complex with Lewis-B
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3ast (Na: 2) - Crystal Structure of P Domain Q389N Mutant From Norovirus FUNABASHI258 Stain in the Complex with Lewis-B
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3atn (Na: 1) - Glycine Ethyl Ester Shielding on the Aromatic Surfaces of Lysozyme: Implication For Suppression of Protein Aggregation
Other atoms:
Cl (10);
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3ato (Na: 1) - Glycine Ethyl Ester Shielding on the Aromatic Surfaces of Lysozyme: Implication For Suppression of Protein Aggregation
Other atoms:
Cl (10);
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3atu (Na: 1) - Crystal Structure of Human HSP70 Nbd in the Adp- and Mg Ion-Bound State
Other atoms:
Mg (1);
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3avp (Na: 2) - Pantothenate Kinase From Mycobacterium Tuberculosis (Mtpank) in Complex with Pantothenol
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3aw6 (Na: 2) - Crystal Structure of Tetragonal Hen Egg White Lysozyme at 84.2% Relative Humidity
Other atoms:
Cl (1);
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3aw7 (Na: 2) - Crystal Structure of Tetragonal Hen Egg White Lysozyme at 71.9% Relative Humidity
Other atoms:
Cl (1);
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3awe (Na: 1) - Crystal Structure of Pten-Like Domain of Ci-Vsp (248-576)
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3axg (Na: 6) - Structure of 6-Aminohexanoate-Oligomer Hydrolase
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3az6 (Na: 1) - Crystal Structure of Co/T-Hewl
Other atoms:
Co (1);
Cl (4);
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3az7 (Na: 1) - Crystal Structure of Pt/T-Hewl
Other atoms:
Pt (5);
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3b0z (Na: 2) - Crystal Structure of Cytoplasmic Domain of Flhb From Salmonella Typhimurium
Other atoms:
Zn (2);
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3b1d (Na: 4) - Crystal Structure of Betac-S Lyase From Streptococcus Anginosus in Complex with L-Serine: External Aldimine Form
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3b1e (Na: 4) - Crystal Structure of Betac-S Lyase From Streptococcus Anginosus in Complex with L-Serine: Alpha-Aminoacrylate Form
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3b1n (Na: 2) - Structure of Burkholderia Thailandensis Nucleoside Kinase (Bthnk) in Complex with Adp-Mizoribine
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3b1p (Na: 1) - Structure of Burkholderia Thailandensis Nucleoside Kinase (Bthnk) in Complex with Adp-Inosine
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3b1q (Na: 15) - Structure of Burkholderia Thailandensis Nucleoside Kinase (Bthnk) in Complex with Inosine
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