Sodium in the structure of Crystal Structure Of Cytoplasmic Domain of Flhb From Salmonella Typhimurium (pdb 3b0z)

The binding sites of Sodium atom in the structure of Crystal Structure Of Cytoplasmic Domain of Flhb From Salmonella Typhimurium (pdb code 3b0z). This binding sites where shown with 5.0 Angstroms radius around Sodium atom. The 3b0z structure was solved by V.A.MESHCHERYAKOV, F.A.SAMATEY, with X-Ray Crystallography technique, brief refinement statistics is given in the table below: Resolution (A) 28.1-2.5 Space group P42212 a (A) 49.102 b (A) 49.102 c (A) 143.045 alpha (°) 90.00 beta (°) 90.00 gamma (°) 90.00 Rfactor (%) 23.1 Rfree (%) 24.7 Sodium Binding Sites: Sodium binding site 1 out of 2 in 3b0z Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Sodium in the PDB 3b0z. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: Lys262, A: Asp264, B: Gln278, A: Hoh13, conact list: Atom Atom Distance (A) Na O A:Lys262 4.05 Na CB A:Asp264 4.92 Na OD2 A:Asp264 3.73 Na OD1 A:Asp264 2.57 Na CG A:Asp264 3.53 Na NE2 B:Gln278 4.52 Na CG B:Gln278 4.69 Na O A:Hoh13 2.11 interactive model: Sodium binding site 2 out of 2 in 3b0z Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 2 of Sodium in the PDB 3b0z. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: B: Glu327, B: Hoh4, conact list: Atom Atom Distance (A) Na OE1 B:Glu327 3.60 Na OE2 B:Glu327 2.02 Na CD B:Glu327 3.11 Na CG B:Glu327 4.37 Na O B:Hoh4 2.26 interactive model: