Sodium in the structure of Crystal Structure of Co/T-Hewl (pdb 3az6)

The binding sites of Sodium atom in the structure of Crystal Structure of Co/T-Hewl (pdb code 3az6). This binding sites where shown with 5.0 Angstroms radius around Sodium atom. The 3az6 structure was solved by S.ABE, M.TSUJIMOTO, K.YONEDA, M.OHBA, T.HIKAGE, M.TAKANO, S.KITAGAWA, T.UENO, with X-Ray Crystallography technique, brief refinement statistics is given in the table below: Resolution (A) 18.8-1.5 Space group P43212 a (A) 78.702 b (A) 78.702 c (A) 36.730 alpha (°) 90.00 beta (°) 90.00 gamma (°) 90.00 Rfactor (%) 19.9 Rfree (%) 22.2 Sodium Binding Sites: Sodium binding site 1 out of 1 in 3az6 Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Sodium in the PDB 3az6. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: Ser60, A: Arg61, A: Trp62, A: Cys64, A: Asn65, A: Asp66, A: Thr69, A: Ser72, A: Arg73, A: Asn74, A: Cl133, A: Hoh144, A: Hoh155, conact list: Atom Atom Distance (A) Na O A:Ser60 2.27 Na CB A:Ser60 4.28 Na C A:Ser60 3.43 Na CA A:Ser60 4.08 Na O A:Arg61 4.59 Na N A:Arg61 4.52 Na C A:Arg61 4.57 Na CA A:Arg61 4.80 Na N A:Trp62 4.89 Na O A:Cys64 2.49 Na N A:Cys64 4.51 Na C A:Cys64 3.54 Na CA A:Cys64 4.67 Na N A:Asn65 4.16 Na CB A:Asn65 4.81 Na ND2 A:Asn65 4.60 Na C A:Asn65 4.82 Na CA A:Asn65 3.94 Na N A:Asp66 4.60 Na CB A:Thr69 4.69 Na O A:Ser72 4.71 Na CB A:Ser72 3.33 Na OG A:Ser72 2.54 Na C A:Ser72 4.13 Na CA A:Ser72 4.36 Na O A:Arg73 2.43 Na N A:Arg73 3.89 Na C A:Arg73 3.47 Na CA A:Arg73 4.28 Na N A:Asn74 4.36 Na CB A:Asn74 4.67 Na CA A:Asn74 4.58 Na CL A:Cl133 4.66 Na O A:Hoh144 2.40 Na O A:Hoh155 2.40 interactive model: