Sodium in PDB, part 300 (files: 11961-12000),
PDB 8y2d-9b02
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 11961-12000 (PDB 8y2d-9b02).
-
8y2d (Na: 2) - Cryo-Em Structure of Human Dopamine Transporter in Complex with Dopamine
Other atoms:
Cl (1);
-
8y4w (Na: 3) - Sialic Acid Bound Form of Tripartite Atp-Independent Periplasmic (Trap) Transporter From Fusobacterium Nucleatum.
-
8y4x (Na: 2) - Apo Form of Tripartite Atp-Independent Periplasmic (Trap) Transporter From Fusobacterium Nucleatum.
-
8y5u (Na: 3) - Human NAS1 Intermediate State 1
-
8y5w (Na: 4) - Human NAS1 Intermediate State 2
-
8y5x (Na: 2) - Human NAS1 Intermediate State 3
-
8y5z (Na: 2) - Human NAS1 Inward State
-
8y6f (Na: 4) - The Crystal Structure of Mmps Cleavable Human Heavy Chain Ferritin
Other atoms:
Cl (4);
Fe (17);
-
8y93 (Na: 1) - Structure of Net-Amitriptyline in Outward-Open State
Other atoms:
Cl (1);
-
8y95 (Na: 2) - Structure of Net-Ne in Occluded State
Other atoms:
Cl (2);
-
8ybg (Na: 1) - Crystal Structure of Lysozyme By Serial Synchrotron Crystallography
Other atoms:
Cl (2);
-
8ybh (Na: 1) - Crystal Structure of Lysozyme By Macromolecular Crystallography
Other atoms:
Cl (2);
-
8ydw (Na: 1) - Crystal Structure of the Receptor Binding Domain of Sars-Cov-2 Omicron Xbb.1.5 Variant Spike Protein in Complex with Cespiace
-
8yja (Na: 1) - Structure of Vibrio Vulnificus Martx Cysteine Protease Domain Lacking Beta-Flap
-
8yjc (Na: 1) - Structure of Vibrio Vulnificus Martx Cysteine Protease Domain C3727A
-
8yk1 (Na: 3) - Blood Group B Alpha-1,3-Galactosidase Agabb From Bifidobacterium Bifidum, Construct 23-844
-
8yk2 (Na: 1) - Blood Group B Alpha-1,3-Galactosidase Agabb From Bifidobacterium Bifidum, Construct T7-TAG_24-700
-
8yk7 (Na: 1) - Structure of Rib Domain From Surface Adhesin of Limosilactobacillus Reuteri
Other atoms:
Cu (2);
-
8you (Na: 1) - The Pmtcdh Complex Structure with An Inhibitor Secn
Other atoms:
Cu (7);
-
8yrc (Na: 1) - Chlorinated Yabj From Staphylococcus Aureus
Other atoms:
Cl (1);
-
8ysv (Na: 2) - Crystal Structure of Beta - Glucosidase 6PG From Enterococcus Faecalis
Other atoms:
Ni (1);
-
8z2x (Na: 1) - Crystal Structure of Exo-Beta-(1,3)-Glucanase From Aspergillus Oryzae (Aobgl) As A Complex with Cellobiose
-
8z2y (Na: 1) - High-Resolution Crystal Structure of Exo-Beta-(1,3)-Glucanase From Aspergillus Oryzae (Aobgl) As A Complex with Glucose
Other atoms:
Cl (1);
-
8z62 (Na: 2) - Crystal Structure of Rrna (Uracil-C5)-Methyltransferase From Pyrococcus Horikoshii OT3
-
8z76 (Na: 1) - The Structure of Thiocyanate Dehydrogenase From Pelomicrobium Methylotrophicum (Pmtcdh), Activated By Crystals Soaking with 1 Mm CUCL2 During 6 Months
Other atoms:
Cu (13);
-
8zhy (Na: 2) - Magnesium Substituted Terephthalate 1,2-Cis- Dihydrodioldehydrogenase/Decarboxylase in Complex with CO2.
Other atoms:
Mg (2);
Zn (3);
-
8zj7 (Na: 1) - Terephthalate 1,2-Cis-Dihydrodioldehydrogenase/Decarboxylase in Complex with 3,4-Dihydroxybenzoate and Nad.
Other atoms:
Cl (1);
Zn (4);
Mg (1);
-
8zmn (Na: 1) - Crystal Structure of ANTXR1
-
8zmu (Na: 1) - Glutamate Dehydrogenase (W89F-Mutant) From Thermococcus Profundus in the Unliganded State
-
8zpb (Na: 2) - Cryo-Em Structure of Human Norepinephrine Transporter Net Bound with Norepinephrine in An Occluded State at A Resolution of 2.6 Angstrom
Other atoms:
Cl (1);
-
8zqo (Na: 2) - Human High-Affinity Choline Transporter CHT1 Bound to Hc-3 Under Nacl Condition, with Sodium and Chloride Ions Coordinated.
Other atoms:
Cl (1);
-
8zqq (Na: 1) - Human High-Affinity Choline Transporter CHT1 Bound to Choline Under Nacl Condition, with Sodium and Chloride Ions Coordinated.
Other atoms:
Cl (1);
-
8zyj (Na: 1) - Cryo-Em Structure of Human Testis-Specific Na+,K+-Atpase ALPHA4 in Ouabain-Bound Form
Other atoms:
F (3);
Mg (1);
-
8zyv (Na: 2) - Bacterial Flagellar Sodium-Driven Stator POMA5POMB2 with 100 Mm Nacl
-
8zyz (Na: 2) - Bacterial Flagellar Sodium-Driven Stator POMA5POMB2(D24N) with 100 Mm Nacl
-
9avk (Na: 1) - Structure of Long Rib Domain From Limosilactobacillus Reuteri
-
9azg (Na: 1) - Native Nnha in H32
-
9azh (Na: 3) - Native Nnha in P1
Other atoms:
Cl (2);
-
9b01 (Na: 1) - Catalytic Mutant C357A Nnha in Ches Buffer
Other atoms:
Cl (2);
-
9b02 (Na: 1) - Nnha C357A Catalytic Mutant in Tris Buffer
Other atoms:
Cl (1);
Page generated: Sat Feb 8 23:48:33 2025
|
