Sodium in PDB, part 291 (files: 11601-11640),
PDB 8r37-8ru1
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 11601-11640 (PDB 8r37-8ru1).
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8r37 (Na: 10) - Klebsiella Pneumoniae Fosfomycin-Resistance Protein (Fosakp)
Other atoms:
Mn (2);
K (2);
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8r39 (Na: 1) - Full-Length Lpmip Mutant Y16F
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8r43 (Na: 1) - Crystal Structure of Paradendryphiella Salina PL7C Alginate Lyase Mutant H110N in Complex with Tri-Mannuronic Acid
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8r6e (Na: 3) - Sars-Cov-2 Nucleocapsid Dimerization Domain
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8r7m (Na: 1) - Ctx-M14 in Complex with Boric Acid and 1,2-Diol Boric Ester
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8r7o (Na: 1) - HUWE1 Wwe Domain in Complex with 2'F-Atp
Other atoms:
F (2);
Cl (3);
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8r7z (Na: 1) - Transcription Factor BARHL2 Homodimer with Spacing Four Bp
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8ral (Na: 3) - CL3E Peptide Bound to the I-Ab Murine Mhc Class II Receptor
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8rbh (Na: 4) - Crystal Structure of the Kelch Domain of Human KLHL12 in Complex with PEF1 Peptide
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8rbi (Na: 1) - Crystal Structure of Paradendryphiella Salina PL7C Alginate Lyase Mutant H124
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8rbu (Na: 2) - Crystal Structure of Hla-A*11:01 in Complex with Svlndilarl, An 10-Mer Epitope From Sars-Cov-2 Spike (S975-984)
Other atoms:
Cl (2);
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8rcv (Na: 2) - Crystal Structure of Hla B*13:01 in Complex with Svlndifsrl, An 10-Mer Epitope From Sars-Cov-2 Spike (S975-984)
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8rdn (Na: 3) - Holomycin Methyltransferase Dtpm with Sah and Xrd-271
Other atoms:
Cl (3);
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8ref (Na: 2) - Crystal Structure of Hla B*13:01 in Complex with Svlndilarl, An 10-Mer Epitope From Sars-Cov-2 Spike (S975-984)
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8reg (Na: 2) - Lysozyme Measured Via Serial Crystallography From A Kapton Hare-Chip (50 Micron)
Other atoms:
Cl (1);
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8reh (Na: 2) - Lysozyme Measured Via Serial Crystallography From A Kapton Hare-Chip (125 Micron)
Other atoms:
Cl (1);
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8rge (Na: 1) - Serial Synchrotron in Plate Room Temperature Structure of Lysozyme.
Other atoms:
Cl (1);
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8rhq (Na: 3) - Crystal Structure of Hla-A*11:01 in Complex with Svlndifsrl, An 10-Mer Epitope From Sars-Cov-2 Spike (S975-984)
Other atoms:
Cl (3);
Mg (1);
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8ri4 (Na: 1) - Crystal Structure of the Sars-Cov-2 Main Protease Inhibited By (2- Methylsulfanyl-6,7-Dihydro-[1,4]Dioxino[2,3-F]Benzimidazol-3-Yl)-(P- Tolyl)Methanone
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8ri6 (Na: 8) - Beta-Galactosidase (Lacz) Purified From E. Coli.
Other atoms:
Mg (8);
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8rib (Na: 5) - N-Terminal Domain of Trypanosoma Brucei PEX14 in Complex with A Pyrazolo-Pyrazolo[4,3-C]Pyridin-3-Yl Compound Showing A Novel Binding Pose
Other atoms:
Cl (1);
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8ris (Na: 1) - Computationally Redesigend Variant of Pyrrolysyl-Trna Synthetase (Y306A)
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8rj0 (Na: 2) - Crystal Structure of Mutant Aspartase From Bacillus Sp. YM55-1 in the Closed Loop Conformation
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8rja (Na: 4) - Crystal Structure of the F420-Reducing Formylmethanofuran Dehydrogenase Complex From the Ethanotroph Candidatus Ethanoperedens Thermophilum
Other atoms:
Cl (4);
Fe (48);
Zn (4);
W (2);
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8rmh (Na: 2) - Crystal Structure of Parallel G-Quadruplex Containing T-Tetrads and Tg-Octaplet
Other atoms:
K (11);
Mg (1);
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8rnv (Na: 3) - Hen Egg White Lysozyme Soaked with Cis-Ru(Dmso)4CL2
Other atoms:
Cl (2);
Ru (2);
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8rnw (Na: 1) - Hen Egg White Lysozyme Soaked with Trans-Ru(Dmso)4CL2
Other atoms:
Cl (4);
Ru (2);
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8rnx (Na: 2) - Hen Egg White Lysozyme Soaked with [Hisq][Trans-RUCL4(Dmso)(Isq)]
Other atoms:
Cl (3);
Ru (1);
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8rny (Na: 3) - Hen Egg White Lysozyme Soaked with with [H2IND][Trans-RUCL4(Dmso) (Hind)]
Other atoms:
Cl (8);
Ru (2);
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8rop (Na: 1) - Crystal Structure of Hla B*18:01 in Complex with Qeirtfsf, An 8-Mer Epitope From Influenza A
Other atoms:
Cl (2);
-
8rov (Na: 2) - Human Dectin-2 with Dimerization Domain
Other atoms:
Ca (4);
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8rpl (Na: 1) - Amp-Forming Acetyl-Coa Synthetase From Chloroflexota Bacterium with Bound Acetyl Amp
Other atoms:
Mg (3);
-
8rpm (Na: 1) - Lysozyme Structure Based on Automated Real-Time Serial Crystallography Data Processing Using Crystfel
Other atoms:
Cl (2);
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8rq5 (Na: 5) - Cryo-Em Structure of the Light-Driven Sodium-Pumping Rhodopsin KR2
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8rsh (Na: 2) - Lysozyme Measured Via Serial Crystallography From A Silicon Hare Chip
Other atoms:
Cl (1);
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8rt2 (Na: 1) - Hen Egg White Lysozyme Crystallized with Bioassembler on Earth
Other atoms:
Gd (4);
Cl (7);
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8rt3 (Na: 1) - Hen Egg White Lysozyme Crystallized with Bioassembler in Space Microgravity Conditions
Other atoms:
Cl (7);
Gd (4);
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8rtg (Na: 1) - Desulfovibrio Desulfuricans [Fefe] Hydrogenase in Apo Form
Other atoms:
Fe (12);
Cl (1);
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8rtn (Na: 1) - Human Thrombin in Complex with A Trivalent Inhibitor
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8ru1 (Na: 7) - Chromatin Remodeling Regulator CECR2 with in Crystallo Disulfide Bond
Page generated: Tue Feb 25 11:42:28 2025
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