Sodium in PDB 8r39: Full-Length Lpmip Mutant Y16F

The structure of Full-Length Lpmip Mutant Y16F, PDB code: 8r39 was solved by J.J.Whittaker, A.Guskov, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	49.06 / 2.20
Space group	P 43 21 2
Cell size a, b, c (Å), α, β, γ (°)	78.444, 78.444, 105.176, 90, 90, 90
R / Rfree (%)	21.8 / 27.1

The binding sites of Sodium atom in the Full-Length Lpmip Mutant Y16F (pdb code 8r39). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Full-Length Lpmip Mutant Y16F, PDB code: 8r39:

Sodium binding site 1 out of 1 in the Full-Length Lpmip Mutant Y16F


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Full-Length Lpmip Mutant Y16F within 5.0Å range: probe atom residue distance (Å) B Occ C:Na307 b:30.0 occ:1.00 OE1 C:GLU176 3.1 39.8 1.0 O C:HOH406 3.2 52.7 1.0 HH22 C:ARG134 3.6 64.8 1.0 CD C:GLU176 3.7 39.9 1.0 HH C:TYR178 3.8 38.7 1.0 OE2 C:GLU176 3.8 40.9 1.0 HZ2 C:LYS111 3.9 90.8 1.0 NH2 C:ARG134 4.0 54.0 1.0 HH21 C:ARG134 4.0 64.8 1.0 OH C:TYR178 4.4 32.2 1.0 HZ3 C:LYS111 4.5 90.8 1.0 NZ C:LYS111 4.6 75.6 1.0 HE2 C:TYR178 4.7 38.4 1.0 HD3 C:LYS111 4.9 55.3 1.0 HZ1 C:LYS111 4.9 90.8 1.0 HH12 C:ARG134 4.9 62.8 1.0 CZ C:ARG134 4.9 56.4 1.0 CG C:GLU176 5.0 35.1 1.0

J.J.Whittaker, A.Guskov. Full-Length Lpmip Mutant Y16F To Be Published.