Sodium in PDB 8r7z: Transcription Factor BARHL2 Homodimer with Spacing Four Bp

Protein crystallography data

The structure of Transcription Factor BARHL2 Homodimer with Spacing Four Bp, PDB code: 8r7z was solved by E.Morgunova, A.Popov, Y.Yin, J.Taipale, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.00 / 3.26
Space group I 21 3
Cell size a, b, c (Å), α, β, γ (°) 159.955, 159.955, 159.955, 90, 90, 90
R / Rfree (%) 19.8 / 25.2

Sodium Binding Sites:

The binding sites of Sodium atom in the Transcription Factor BARHL2 Homodimer with Spacing Four Bp (pdb code 8r7z). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Transcription Factor BARHL2 Homodimer with Spacing Four Bp, PDB code: 8r7z:

Sodium binding site 1 out of 1 in 8r7z

Go back to Sodium Binding Sites List in 8r7z
Sodium binding site 1 out of 1 in the Transcription Factor BARHL2 Homodimer with Spacing Four Bp


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Transcription Factor BARHL2 Homodimer with Spacing Four Bp within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Na500

b:101.0
occ:0.50
CD2 E:TYR256 3.6 126.8 1.0
CE2 E:TYR256 3.7 120.7 1.0
CG E:TYR256 4.4 115.7 1.0
CZ E:TYR256 4.5 114.3 1.0

Reference:

E.Morgunova, A.Popov, Y.Yin, J.Taipale. Transcription Factor BARHL2 Homodimer with 4 Bp Spacing To Be Published.
Page generated: Tue Dec 10 21:19:29 2024

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