Sodium in PDB 8rbi: Crystal Structure of Paradendryphiella Salina PL7C Alginate Lyase Mutant H124

The structure of Crystal Structure of Paradendryphiella Salina PL7C Alginate Lyase Mutant H124, PDB code: 8rbi was solved by C.Wilkens, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	33.52 / 0.98
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	76.52, 38.45, 74.01, 90, 116.62, 90
R / Rfree (%)	12.4 / 14.9

The binding sites of Sodium atom in the Crystal Structure of Paradendryphiella Salina PL7C Alginate Lyase Mutant H124 (pdb code 8rbi). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of Paradendryphiella Salina PL7C Alginate Lyase Mutant H124, PDB code: 8rbi:

Sodium binding site 1 out of 1 in the Crystal Structure of Paradendryphiella Salina PL7C Alginate Lyase Mutant H124


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of Paradendryphiella Salina PL7C Alginate Lyase Mutant H124 within 5.0Å range: probe atom residue distance (Å) B Occ A:Na302 b:11.4 occ:1.00 HZ3 A:LYS234 2.4 15.3 1.0 HH12 A:ARG232 2.4 15.6 1.0 HH22 A:ARG232 2.5 15.5 1.0 HB3 A:PRO109 3.0 14.0 1.0 HE2 A:LYS234 3.2 15.2 1.0 NZ A:LYS234 3.2 12.7 1.0 NH1 A:ARG232 3.2 13.0 1.0 NH2 A:ARG232 3.3 12.9 1.0 HD3 A:LYS234 3.4 14.6 1.0 HZ1 A:LYS234 3.5 15.3 1.0 CE A:LYS234 3.6 12.7 1.0 H11 A:PEG301 3.7 63.2 1.0 CZ A:ARG232 3.7 11.9 1.0 HZ2 A:LYS234 3.9 15.3 1.0 CB A:PRO109 3.9 11.7 1.0 HH11 A:ARG232 3.9 15.6 1.0 HB2 A:PRO109 4.0 14.0 1.0 CD A:LYS234 4.0 12.2 1.0 HH21 A:ARG232 4.0 15.5 1.0 O A:HOH614 4.0 23.7 1.0 HG3 A:PRO109 4.1 14.1 1.0 HE3 A:LYS234 4.5 15.2 1.0 HG3 A:LYS234 4.5 13.6 1.0 CG A:PRO109 4.6 11.7 1.0 HG12 A:VAL107 4.6 15.5 1.0 C1 A:PEG301 4.7 52.6 1.0 HE22 A:GLN61 4.7 20.2 1.0 HG11 A:VAL107 4.7 15.5 1.0 HD2 A:LYS234 4.7 14.6 1.0 H21 A:PEG301 4.9 63.4 1.0 CG A:LYS234 4.9 11.3 1.0 HA A:PRO109 4.9 13.6 1.0 NE2 A:GLN61 5.0 16.8 1.0 O A:HOH608 5.0 13.5 1.0

C.Wilkens, C.Wilkens. N/A N/A.