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Sodium in PDB, part 259 (files: 10321-10360), PDB 7sub-7tvf

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 10321-10360 (PDB 7sub-7tvf).
  1. 7sub (Na: 2) - 3-Oxoacyl-Acp Reductase Fabg
  2. 7sxl (Na: 2) - Plasmodium Falciparum Apicoplast Dna Polymerase (Exo-Minus) Without Affinity Tag
    Other atoms: Cl (8);
  3. 7sxm (Na: 1) - Structure of Xenon-Derivatized Methyl-Coenzyme M Reductase From Methanothermobacter Marburgensis
    Other atoms: Mg (2); Ni (2); Xe (8);
  4. 7sxq (Na: 2) - Plasmodium Falciparum Apicoplast Dna Polymerase (Exo-Minus) Without Affinity Tag
    Other atoms: Cl (6);
  5. 7syv (Na: 1) - Structure of the Wt Ires EIF5B-Containing Pre-48S Initiation Complex, Open Conformation. Structure 14(Wt)
    Other atoms: Zn (2); Mg (1);
  6. 7syw (Na: 1) - Structure of the Wt Ires EIF5B-Containing 48S Initiation Complex, Closed Conformation. Structure 15(Wt)
    Other atoms: Zn (1); Mg (1);
  7. 7sz8 (Na: 2) - Crystal Structure of Human CELSR1 EC4-7
    Other atoms: Mg (1); Ca (16); Cl (1);
  8. 7sz9 (Na: 2) - Crosslinked Crystal Structure of Type II Fatty Acid Synthase Ketosynthase, Fabb, and C16:1-Crypto Acyl Carrier Protein, Acpp
  9. 7szu (Na: 1) - Crystal Structure of Pepper Rna Aptamer in Complex with Hbc Ligand and Fab BL3-6
    Other atoms: Mg (2);
  10. 7t1k (Na: 1) - Crystal Structure of A Superbinder Fes SH2 Domain (SFES1) in Complex with A High Affinity Phosphopeptide
    Other atoms: Cl (2);
  11. 7t1l (Na: 1) - Crystal Structure of A Superbinder Fes SH2 Domain (Sfess) in Complex with A High Affinity Phosphopeptide
    Other atoms: Cl (1);
  12. 7t3s (Na: 1) - Crystal Structure of Mouse Cadherin-23 EC8-9
    Other atoms: Ca (3);
  13. 7t78 (Na: 2) - Crystal Structure of Glucokinase (Hexokinase 4) Complexed with Ligand Diethyl ({2-[3-(4-Methanesulfonylpheno Xy)-5-{[(2S)-1-Methoxypropan- 2-Yl]Oxy}Benzamido]-1,3-Thiaz Ol-4-Yl}Methyl)Phosphonate
  14. 7t7h (Na: 2) - Crystal Structure of Vaccinia Virus Decapping Enzyme D9 in Complex with Inhibitor CP100356
  15. 7t7z (Na: 1) - The Crystal Structure of Family 8 Carbohydrate-Binding Module From Dictyostelium Discoideum
  16. 7t84 (Na: 1) - Structure of Angiotensin II Type I Receptor (AT1R) Nanobody Antagonist AT118I4H32 G26D T57I Variant
  17. 7t88 (Na: 1) - Crystal Structure of the C-Terminal Domain of the Phosphate Acetyltransferase From Escherichia Coli
    Other atoms: K (1); Cl (1); I (2);
  18. 7t8d (Na: 1) - Myocilin Olf Mutant V449I
    Other atoms: Ca (1);
  19. 7t9g (Na: 4) - Structure of Vcindy-Na+
  20. 7tb0 (Na: 3) - E. Faecium Muraa in Complex with Fosfomycin and Unag
    Other atoms: K (10); Cl (4);
  21. 7tbg (Na: 1) - ATTPC1 D454N with 1 Mm CA2+
    Other atoms: Ca (4);
  22. 7tc5 (Na: 1) - All Phe-Azurin Variant - F15Y
    Other atoms: Cu (3);
  23. 7tds (Na: 1) - Labrum-Interacting Protein From Saliva Lips-2 (34K-2) From Aedes Albopictus, Native Data
  24. 7tgr (Na: 1) - Structure of Sars-Cov-2 Main Protease in Complex with GC376
    Other atoms: Cl (2); K (1);
  25. 7th5 (Na: 2) - Thermus Thermophilus Methylenetetrahydrofolate Reductase
  26. 7thu (Na: 2) - Structure of Reduced Bovine Cytochrome C Oxidase at 1.93 Angstrom Resolution Obtained By Synchrotron X-Rays
    Other atoms: Zn (2); Cu (6); Fe (4); Mg (2);
  27. 7tie (Na: 2) - Structure of Oxidized Bovine Cytochrome C Oxidase at 1.90 Angstrom Resolution Obtained By Synchrotron X-Rays
    Other atoms: Mg (2); Cu (6); Zn (2); Fe (4);
  28. 7tih (Na: 2) - Structure of Oxidized Bovine Cytochrome C Oxidase with Reduced Metal Centers Induced By Synchrotron X-Ray Exposure
    Other atoms: Fe (4); Cu (6); Zn (2); Mg (2);
  29. 7tii (Na: 2) - Annealed Structure of Oxidized Bovine Cytochrome C Oxidase with Reduced Metal Centers Induced By Synchrotron X-Ray Exposure
    Other atoms: Mg (2); Cu (6); Zn (2); Fe (4);
  30. 7tin (Na: 4) - The Structure of S. Aureus Mend
    Other atoms: Cl (1); Ca (4);
  31. 7tiz (Na: 1) - Crystal Structure of Sars-Cov-2 3CL in Complex with Inhibitor NK01-63
    Other atoms: F (3);
  32. 7tl7 (Na: 4) - 1.90A Resolution Structure of Independent Phosphoglycerate Mutase From C. Elegans in Complex with A Macrocyclic Peptide Inhibitor (Sa-D2)
    Other atoms: Zn (8);
  33. 7tlt (Na: 2) - Sars-Cov-2 Spike-Derived Peptide S489-497 (Yfplqsygf) Presented By Hla-A*29:02
    Other atoms: Mg (2);
  34. 7tmb (Na: 6) - Crystal Structure of N-Ethylmaleimide Reductase From Klebsiella Pneumoniae
  35. 7tnh (Na: 1) - Crystal Structure of CSF1R Kinase Domain in Complex with Dp-6233
    Other atoms: Cl (4);
  36. 7to5 (Na: 1) - Hiv-1 Wild Type Protease with Grl-05816A, with C-4 Substituted Cyclohexane-Fused Bis-Tetrahydrofuran (Chf-Thf) Derivatives As P2- Ligand [Diastereomer 1]
    Other atoms: Cl (3);
  37. 7to6 (Na: 1) - Hiv-1 Wild Type Protease with Grl-01717A, with C-4 Substituted Cyclohexane-Fused Bis-Tetrahydrofuran (Chf-Thf) Derivatives As P2- Ligand [Diastereomer 2]
    Other atoms: Cl (3); F (4);
  38. 7tpm (Na: 1) - Structure of the Outer-Membrane Lipoprotein Carrier Protein (Lola) From Borrelia Burgdorferi
    Other atoms: Cl (3);
  39. 7tum (Na: 1) - Multi-Hit Sfx Using Mhz Xfel Sources- First Hit
  40. 7tvf (Na: 2) - Crystal Structure of the SHOC2-Mras-PP1CA (Smp) Complex to A Resolution of 2.17 Angstrom
    Other atoms: Cl (5); Mn (4); Mg (2);
Page generated: Fri Jul 28 12:35:11 2023

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