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Sodium in PDB, part 210 (files: 8361-8400), PDB 6nfp-6nxs

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 8361-8400 (PDB 6nfp-6nxs).
  1. 6nfp (Na: 3) - 1.7 Angstrom Resolution Crystal Structure of Arginase From Bacillus Subtilis Subsp. Subtilis Str. 168
    Other atoms: Mg (12); Cl (10);
  2. 6nfx (Na: 1) - MBTD1 Mbt Repeats
  3. 6nib (Na: 2) - Crystal Structure of Medicago Truncatula Agmatine Iminohydrolase (Deiminase)
  4. 6nic (Na: 4) - Crystal Structure of Medicago Truncatula Agmatine Iminohydrolase (Deiminase) in Complex with 6-Aminohexanamide
  5. 6nje (Na: 1) - Crystal Structure of the Motor Domain of Human Kinesin Family Member 22
    Other atoms: Mg (1); Cl (3);
  6. 6nkn (Na: 2) - Time-Resolved Sfx Structure of the Pr Intermediate of Cytochrome C Oxidase at Room Temperature
    Other atoms: Mg (2); Zn (2); Fe (4); Cu (6);
  7. 6nkr (Na: 3) - Ternary Complex Crystal Structure of K289M Variant of Dna Polymerase Beta with Dgtp
    Other atoms: Mg (1); Cl (2);
  8. 6nks (Na: 3) - Ternary Complex Crystal Structure of K289M Variant of Dna Polymerase Beta with Beta-Gamma Chf Analog of Dgtp
    Other atoms: F (1); Mg (1); Cl (3);
  9. 6nkt (Na: 2) - Ternary Complex Crystal Structure of K289M Variant of Dna Polymerase Beta with Beta-Gamma Difluoro Analogue of Dgtp
    Other atoms: F (2);
  10. 6nku (Na: 3) - Ternary Complex Crystal Structure of Dna Polymerase Beta with "Hot- Spot Sequence" with Dgtp
    Other atoms: Mg (2); Cl (4);
  11. 6nkv (Na: 3) - Ternary Complex Crystal Structure of Dna Polymerase Beta with "Hot- Spot Sequence" with Beta-Gamma Chf Analogue of Dgtp
    Other atoms: F (1); Mg (2); Cl (3);
  12. 6nkw (Na: 3) - Ternary Complex Crystal Structure of Dna Polymerase Beta with "Hot- Spot Sequence" with Beta-Gamma-Methylene Dgtp
    Other atoms: Mg (2); Cl (4);
  13. 6nkx (Na: 3) - Ternary Complex Crystal Structure of K289M Variant of Dna Polymerase Beta with "Hot-Spot Sequence" with Dgtp
    Other atoms: Mg (1); Cl (1);
  14. 6nky (Na: 3) - Ternary Complex Crystal Structure of K289M Variant of Dna Polymerase Beta with "Hot-Spot Sequence" with Beta-Gamma Chf Analogue of Dgtp
    Other atoms: F (1); Mg (1); Cl (3);
  15. 6nkz (Na: 3) - Ternary Complex Crystal Structure of K289M Variant of Dna Polymerase Beta with "Hot-Spot Sequence" with Beta-Gamma Methylene Dgtp
    Other atoms: Mg (1);
  16. 6nl0 (Na: 3) - Ternary Complex Crystal Structure of K289M Variant of Dna Polymerase Beta with "Hot-Spot Sequence" with Beta-Gamma CF2 Analogue of Dgtp
    Other atoms: F (2); Mg (1); Cl (1);
  17. 6nl7 (Na: 4) - Crystal Structure of B1 Immunoglobulin-Binding Domain of Streptococcal Protein G (T16F, T18A, V21H, T25H, K28Y, V29I, K31R, Q32A, Y33L, N35K, D36A, N37Q)
    Other atoms: Zn (4); Cl (1);
  18. 6nl9 (Na: 2) - Crystal Structure of De Novo Designed Metal-Controlled Dimer of Mutant B1 Immunoglobulin-Binding Domain of Streptococcal Protein G (L12H, T16L, V29H, Y33H, N37L)-Apo
    Other atoms: Mg (1);
  19. 6nla (Na: 2) - Crystal Structure of De Novo Designed Metal-Controlled Dimer of B1 Immunoglobulin-Binding Domain of Streptococcal Protein G (L12H, E15V, T16L, T18I, V29H, Y33H, N37L)-Zinc
    Other atoms: Cl (3); Zn (2);
  20. 6nle (Na: 2) - X-Ray Structure of Leut with V269 Deletion
  21. 6nlh (Na: 20) - Structure of Human Triose Phosphate Isomerase R189A
    Other atoms: Br (4);
  22. 6nmf (Na: 2) - Sfx Structure of Reduced Cytochrome C Oxidase at Room Temperature
    Other atoms: Mg (2); Zn (2); Fe (4); Cu (6);
  23. 6nmp (Na: 2) - Sfx Structure of Oxidized Cytochrome C Oxidase at Room Temperature
    Other atoms: Mg (2); Zn (2); Fe (4); Cu (6);
  24. 6nnr (Na: 1) - High-Resolution Structure of Wild-Type E. Coli Thymidylate Synthase
  25. 6nok (Na: 1) - The X-Ray Crystal Structure of Streptococcus Pneumoniae Fatty Acid Kinase (Fak) B1 Protein Loaded with Myristic Acid (C14:0) to 1.69 Angstrom Resolution
  26. 6nq4 (Na: 3) - Crystal Structure of A Hydrolase, Haloacid Dehalogenase-Like Family From Brucella Suis 1330
  27. 6nr0 (Na: 4) - SIRT2(56-356) with Covalent Intermediate Between Mechanism-Based Inhibitor Glucose-Tm-1BETA and 1'-Sh Adp-Ribose
    Other atoms: Zn (2);
  28. 6nrz (Na: 2) - Crystal Structure of Lysyl-Trna Synthetase From Chlamydia Trachomatis Complexed with L-Lysine and Adenosine
    Other atoms: Cl (1);
  29. 6ns0 (Na: 2) - Crystal Structure of Lysyl-Trna Synthetase From Chlamydia Trachomatis Complexed with L-Lysine and Cladosporin
    Other atoms: Cl (1);
  30. 6nsi (Na: 2) - Crystal Structure of Fe(III)-Bound Ytga From Chlamydia Trachomatis
    Other atoms: Fe (1); Ca (1);
  31. 6nsv (Na: 2) - Crystal Structure of the Human Chip Tpr Domain in Complex with A 5MER Acetylated Optimized Peptide
    Other atoms: Cl (1);
  32. 6nu7 (Na: 2) - Structure of Sucrose-6-Phosphate Hydrolase From Lactobacillus Gasseri
  33. 6nuc (Na: 1) - Structure of Calcineurin in Complex with NHE1 Peptide
    Other atoms: Zn (1); Fe (1); Ca (4);
  34. 6nuf (Na: 1) - Structure of Calcineurin in Complex with NHE1 Peptide
    Other atoms: Zn (1); Fe (1); Ca (4);
  35. 6nva (Na: 2) - Crystal Structure of Escherichia Coli Dihydrodipicolinate Synthase and Propionate Covalently Bound to K161.
  36. 6nvu (Na: 1) - Crystal Structure of Tla-1 Extended Spectrum Beta-Lactamase in Complex with Clavulanic Acid
    Other atoms: Cl (2);
  37. 6nw9 (Na: 3) - Crystal Structure of A Tailspike Protein 3 (TSP3, ORF212) From Escherichia Coli O157:H7 Bacteriophage CBA120
    Other atoms: Mg (1); Cl (6);
  38. 6nxq (Na: 1) - Crystal Structure of Arabidopsis Thaliana Cytosolic Triosephosphate Isomerase C13A Mutant
  39. 6nxr (Na: 1) - Crystal Structure of Arabidopsis Thaliana Cytosolic Triosephosphate Isomerase C13D Mutant
  40. 6nxs (Na: 4) - Crystal Structure of Arabidopsis Thaliana Cytosolic Triosephosphate Isomerase C218Y Mutant
Page generated: Sat Sep 25 14:51:19 2021

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