Sodium in PDB, part 205 (files: 8161-8200),
PDB 6jbd-6k96
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 8161-8200 (PDB 6jbd-6k96).
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6jbd (Na: 2) - Phosphotransferase-Atp Complex Related to Coa Biosynthesis Pathway
Other atoms:
Mg (1);
Ca (3);
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6jbu (Na: 3) - High Resolution Crystal Structure of Human FLRT3 Lrr Domain in Complex with Mouse CIRL3 Olfactomedin Like Domain
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6jbv (Na: 3) - Crystal Structure of Spae Basal Pilin From Lactobacillus Rhamnosus Gg - Selenium Derivative
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6jch (Na: 3) - Crystal Structure of Spae Basal Pilin From Lactobacillus Rhamnosus Gg - Orthorhombic Form
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6jcl (Na: 1) - Crystal Structure of Cofactor-Bound RV0187 From Mtb
Other atoms:
Sr (10);
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6jd0 (Na: 5) - Structure of Mutant Human Cathepsin L, Engineered For Gag Binding
Other atoms:
Cl (3);
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6jdp (Na: 1) - The IMM52 Family Protein Tsit (PA3908) From Pseudomonas Aeruginosa
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6ji2 (Na: 2) - Crystal Structure of Archaeal Ribosomal Protein AP1, Apelota, and Gtp- Bound AEF1A Complex
Other atoms:
Mg (2);
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6jiz (Na: 2) - Apo Structure of An Imine Reductase at 1.76 Angstrom Resolution
Other atoms:
Cl (5);
-
6jje (Na: 1) - Crystal Structure of A Two-Quartet Dna Mixed-Parallel/Antiparallel G- Quadruplex (Bru)
Other atoms:
Co (3);
K (3);
Br (2);
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6jjf (Na: 1) - Crystal Structure of A Two-Quartet Dna Mixed-Parallel/Antiparallel G- Quadruplex
Other atoms:
Co (3);
K (3);
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6jjg (Na: 1) - Crystal Structure of A Two-Quartet Dna Mixed-Parallel/Antiparallel G- Quadruplex
Other atoms:
K (3);
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6jjq (Na: 2) - Crystal Structure of Peptidyl-Trna Hydrolase From Acinetobacter Baumannii at 0.99 A Resolution.
Other atoms:
Cl (3);
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6jki (Na: 2) - Crystal Structure and Catalytic Mechanism of the Essential M1G37 Trna Methyltransferase Trmd From Pseudomonas Aeruginosa
Other atoms:
Mn (3);
-
6jku (Na: 4) - Crystal Structure of N-Acetylglucosamine-6-Phosphate Deacetylase From Pasteurella Multocida
Other atoms:
Zn (4);
-
6jkx (Na: 13) - Crystal Structure of Peptidyl-Trna Hydrolase with Multiple Sodium and Chloride Ions at 1.08 A Resolution.
Other atoms:
Cl (3);
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6jm5 (Na: 1) - Crystal Structure of TBC1D23 C Terminal Domain
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6jme (Na: 3) - Crystal Structure of Human Dhodh in Complex with Inhibitor 0946
Other atoms:
F (6);
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6jmv (Na: 2) - Crystal Structure of the GLUK3 Ligand Binding Domain Complex with Sym and Zinc
Other atoms:
Zn (4);
Cl (4);
-
6jnh (Na: 1) - Crystal Structure of the Complex of Phosphopantetheine Adenylyltransferasefrom Acinetobacter Baumannii with Ascorbic Acid (Vitamin-C) at 2.0A Resolution
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6jpr (Na: 5) - Crystal Structure of Phycocyanin From Nostoc Sp. R76DM
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6jsc (Na: 4) - Crystal Structure of the H434A Variant of the C-Terminal Domain of Htaa From Corynebacterium Glutamicum
Other atoms:
Fe (2);
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6jsg (Na: 1) - Crystal Structure of BACE1 in Complex with N-{3-[(4S)-2-Amino-4- Methyl-5,6-Dihydro-4H-1,3-Thiazin-4-Yl]-4-Fluorophenyl}-5- Chloropyridine-2-Carboxamide
Other atoms:
F (1);
I (3);
Cl (1);
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6juw (Na: 4) - Bovine Heart Cytochrome C Oxidase in Catalitic Intermediates at 1.80 Angstrom Resolution
Other atoms:
Mg (2);
Zn (2);
Fe (4);
Cu (6);
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6jy3 (Na: 2) - Monomeric Form of Bovine Heart Cytochrome C Oxidase in the Fully Oxidized State
Other atoms:
Mg (1);
Zn (1);
Fe (2);
Cu (3);
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6jy4 (Na: 2) - Monomeric Form of Bovine Heart Cytochrome C Oxidase in the Fully Reduced State
Other atoms:
Mg (1);
Zn (1);
Fe (2);
Cu (3);
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6jyv (Na: 2) - Structure of An Isopenicillin N Synthase From Pseudomonas Aeruginosa PAO1
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6jzh (Na: 1) - Structure of Human A2A Adenosine Receptor in Complex with ZM241385 Obtained From Sfx Experiments Under Atmospheric Pressure
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6jzi (Na: 1) - Structure of Hen Egg-White Lysozyme Obtained From Sfx Experiments Under Atmospheric Pressure
Other atoms:
Cl (2);
-
6jzo (Na: 4) - Structure of the Mouse TRPC4 Ion Channel
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6k17 (Na: 4) - Crystal Structure of EXD2 Exonuclease Domain
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6k21 (Na: 1) - Pyrophosphatase From Acinetobacter Baumannii
Other atoms:
Mg (1);
-
6k26 (Na: 2) - Crystal Structure of Vibrio Cholerae Methionine Aminopeptidase
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6k2o (Na: 1) - Structural Basis of Glycan Recognition in Globally Predominant Human P[8] Rotavirus
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6k5q (Na: 1) - Crystal Structure of Lysozyme Complexed with A Bioactive Compound From Jatropha Gossypiifolia
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6k82 (Na: 1) - RGLG1 Mutant-D338A E378A
Other atoms:
Mg (1);
-
6k86 (Na: 1) - The Closed State of RGLG1 Mutant-E378A
Other atoms:
Mg (1);
-
6k89 (Na: 1) - The Closed State of RGLG1 Vwa Domain
Other atoms:
Mg (1);
-
6k8g (Na: 1) - H/D Exchanged Hen Egg-White Lysozyme
Other atoms:
Cl (1);
-
6k96 (Na: 2) - Crystal Structure of ARI2
Page generated: Thu Dec 28 11:26:56 2023
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