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Sodium in PDB, part 205 (files: 8161-8200), PDB 6jjq-6ksn

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 8161-8200 (PDB 6jjq-6ksn).
  1. 6jjq (Na: 2) - Crystal Structure of Peptidyl-Trna Hydrolase From Acinetobacter Baumannii at 0.99 A Resolution.
    Other atoms: Cl (3);
  2. 6jki (Na: 2) - Crystal Structure and Catalytic Mechanism of the Essential M1G37 Trna Methyltransferase Trmd From Pseudomonas Aeruginosa
    Other atoms: Mn (3);
  3. 6jku (Na: 4) - Crystal Structure of N-Acetylglucosamine-6-Phosphate Deacetylase From Pasteurella Multocida
    Other atoms: Zn (4);
  4. 6jkx (Na: 13) - Crystal Structure of Peptidyl-Trna Hydrolase with Multiple Sodium and Chloride Ions at 1.08 A Resolution.
    Other atoms: Cl (3);
  5. 6jm5 (Na: 1) - Crystal Structure of TBC1D23 C Terminal Domain
  6. 6jme (Na: 3) - Crystal Structure of Human Dhodh in Complex with Inhibitor 0946
    Other atoms: F (6);
  7. 6jmv (Na: 2) - Crystal Structure of the GLUK3 Ligand Binding Domain Complex with Sym and Zinc
    Other atoms: Zn (4); Cl (4);
  8. 6jnh (Na: 1) - Crystal Structure of the Complex of Phosphopantetheine Adenylyltransferasefrom Acinetobacter Baumannii with Ascorbic Acid (Vitamin-C) at 2.0A Resolution
  9. 6jpr (Na: 5) - Crystal Structure of Phycocyanin From Nostoc Sp. R76DM
  10. 6jsc (Na: 4) - Crystal Structure of the H434A Variant of the C-Terminal Domain of Htaa From Corynebacterium Glutamicum
    Other atoms: Fe (2);
  11. 6jsg (Na: 1) - Crystal Structure of BACE1 in Complex with N-{3-[(4S)-2-Amino-4- Methyl-5,6-Dihydro-4H-1,3-Thiazin-4-Yl]-4-Fluorophenyl}-5- Chloropyridine-2-Carboxamide
    Other atoms: F (1); I (3); Cl (1);
  12. 6juw (Na: 4) - Bovine Heart Cytochrome C Oxidase in Catalitic Intermediates at 1.80 Angstrom Resolution
    Other atoms: Mg (2); Zn (2); Fe (4); Cu (6);
  13. 6jy3 (Na: 2) - Monomeric Form of Bovine Heart Cytochrome C Oxidase in the Fully Oxidized State
    Other atoms: Mg (1); Zn (1); Fe (2); Cu (3);
  14. 6jy4 (Na: 2) - Monomeric Form of Bovine Heart Cytochrome C Oxidase in the Fully Reduced State
    Other atoms: Mg (1); Zn (1); Fe (2); Cu (3);
  15. 6jyv (Na: 2) - Structure of An Isopenicillin N Synthase From Pseudomonas Aeruginosa PAO1
  16. 6jzh (Na: 1) - Structure of Human A2A Adenosine Receptor in Complex with ZM241385 Obtained From Sfx Experiments Under Atmospheric Pressure
  17. 6jzi (Na: 1) - Structure of Hen Egg-White Lysozyme Obtained From Sfx Experiments Under Atmospheric Pressure
    Other atoms: Cl (2);
  18. 6k17 (Na: 4) - Crystal Structure of EXD2 Exonuclease Domain
  19. 6k21 (Na: 1) - Pyrophosphatase From Acinetobacter Baumannii
    Other atoms: Mg (1);
  20. 6k26 (Na: 2) - Crystal Structure of Vibrio Cholerae Methionine Aminopeptidase
  21. 6k2o (Na: 1) - Structural Basis of Glycan Recognition in Globally Predominant Human P[8] Rotavirus
  22. 6k5q (Na: 1) - Crystal Structure of Lysozyme Complexed with A Bioactive Compound From Jatropha Gossypiifolia
  23. 6k82 (Na: 1) - RGLG1 Mutant-D338A E378A
    Other atoms: Mg (1);
  24. 6k86 (Na: 1) - The Closed State of RGLG1 Mutant-E378A
    Other atoms: Mg (1);
  25. 6k89 (Na: 1) - The Closed State of RGLG1 Vwa Domain
    Other atoms: Mg (1);
  26. 6k8g (Na: 1) - H/D Exchanged Hen Egg-White Lysozyme
    Other atoms: Cl (1);
  27. 6k96 (Na: 2) - Crystal Structure of ARI2
  28. 6kcb (Na: 2) - Room Temperature Structure of Lysozyme Delivered in Shortening A By Serial Millisecond Crystallography
    Other atoms: Cl (2);
  29. 6kcd (Na: 1) - Room Temperature Structure of Lysozyme Delivered in Shortening B By Serial Millisecond Crystallography
    Other atoms: Cl (2);
  30. 6kd1 (Na: 1) - Room Temperature Structure of Lysozyme Delivered in Agarose By Serial Millisecond Crystallography
    Other atoms: Cl (2);
  31. 6kfn (Na: 2) - Crystal Structure of Alginate Lyase From Paenibacillus Sp. Str. Fpu-7
  32. 6kgh (Na: 1) - Crystal Structure of Penicillin Binding Protein 3 (PBP3) From Mycobacterium Tuerculosis (Apo-Form)
    Other atoms: Co (3);
  33. 6ki1 (Na: 2) - The Transmembrane Domain of A Cyanobacterium Bicarbonate Transporter Bica
  34. 6kko (Na: 2) - The Crystal Structure of Siab-Siac Complex From Pseudomonas Aeruginosa
  35. 6kl8 (Na: 1) - Crystal Structure of Piptidyl T-Rna Hydrolase From Acinetobacter Baumannii with Bound Nacl at the Substrate Binding Site
    Other atoms: Cl (1);
  36. 6koz (Na: 2) - Crystal Structure of Two Domain M1 Zinc Metallopeptidase E323 Mutant Bound to L-Leucine Amino Acid
    Other atoms: Zn (2);
  37. 6kp0 (Na: 2) - Crystal Structure of Two Domain M1 Zinc Metallopeptidase E323A Mutant Bound to L-Arginine
    Other atoms: Zn (2);
  38. 6kp1 (Na: 2) - Crystal Structure of Two Domain M1 Zinc Metallopeptidase E323A Mutant Bound to L-Methionine Amino Acid
    Other atoms: Zn (2);
  39. 6kqt (Na: 1) - Crystal Structure of GH136 Lacto-N-Biosidase From Eubacterium Ramulus - Native Protein
  40. 6ksn (Na: 1) - Structure of A Zn-Bound Camelid Single Domain Antibody
    Other atoms: Zn (2);
Page generated: Tue Dec 1 10:46:35 2020

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