Atomistry » Sodium » PDB 4pd5-4poc
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Sodium in PDB, part 119 (files: 4721-4760), PDB 4pd5-4poc

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 4721-4760 (PDB 4pd5-4poc).
  1. 4pd5 (Na: 1) - Crystal Structure of Vccnt-7C8C Bound to Gemcitabine
    Other atoms: F (2);
  2. 4pd6 (Na: 1) - Crystal Structure of Vccnt-7C8C Bound to Uridine
  3. 4pd7 (Na: 1) - Structure of Vccnt Bound to Zebularine
  4. 4pd8 (Na: 1) - Structure of Vccnt-7C8C Bound to Pyrrolo-Cytidine
  5. 4pd9 (Na: 1) - Structure of Vccnt-7C8C Bound to Adenosine
  6. 4pda (Na: 1) - Structure of Vccnt-7C8C Bound to Cytidine
  7. 4pdl (Na: 1) - Structure of K+ Selective Nak Mutant in Caesium
    Other atoms: Cs (5);
  8. 4pdr (Na: 2) - Crystal Structure of A K+ Selective Nak Mutant in Barium and Sodium
    Other atoms: Ba (6);
  9. 4pf4 (Na: 2) - 1.1A X-Ray Structure of the Apo Catalytic Domain of Death-Associated Protein Kinase 1, Aa 1-277
    Other atoms: Mg (1);
  10. 4pfi (Na: 1) - Crystal Structure of A Trap Periplasmic Solute Binding Protein From Marinobacter Aquaeolei VT8 (MAQU_2829, Target Efi-510133), Apo Open Structure
  11. 4pfm (Na: 2) - Shewanella Benthica Dhdps with Lysine and Pyruvate
  12. 4pfz (Na: 2) - X-Ray Crystal Structure of 5-Carboxymethyl-2-Hydroxymuconate Delta- Isomerase From Mycobacterium Smegmatis
  13. 4pgq (Na: 2) - Structure of Human Dna Polymerase Beta Complexed with G in the Template Base Paired with Incoming Non-Hydrolyzable Ttp
    Other atoms: Mg (2);
  14. 4pgx (Na: 2) - Structure of Human Dna Polymerase Beta Complexed with G in the Template Base Paired with Incoming Non-Hydrolyzable Ttp and Manganese
    Other atoms: Mn (2);
  15. 4pgy (Na: 2) - Structure of Human Dna Polymerase Beta Complexed with A Nicked Dna Containing A Gt at N-1 Position and Gc at N Position
  16. 4ph5 (Na: 2) - Structure of Human Dna Polymerase Beta Complexed with A Nicked Dna Containing A Ac at N-1 Position and Gc at N Position
    Other atoms: Mg (2);
  17. 4pha (Na: 2) - Structure of Human Dna Polymerase Beta Complexed with A in the Template Base Paired with Incoming Non-Hydrolyzable Ctp
    Other atoms: Mg (2);
  18. 4phd (Na: 2) - Structure of Human Dna Polymerase Beta Complexed with A in the Template Base Paired with Incoming Non-Hydrolyzable Ctp and Manganese
    Other atoms: Mn (2);
  19. 4phe (Na: 2) - Structure of Human Dna Polymerase Beta Complexed with T in the Template Base Paired with Incoming Non-Hydrolyzable Gtp
    Other atoms: Mg (2);
  20. 4phi (Na: 6) - Crystal Structure of Hewl with Hexatungstotellurate(VI)
    Other atoms: W (48); Te (8);
  21. 4php (Na: 2) - Structure of Human Dna Polymerase Beta Complexed with T in the Template Base Paired with Incoming Non-Hydrolyzable Gtp and Manganese
    Other atoms: Mn (2);
  22. 4pig (Na: 1) - Crystal Structure of the Ubiquitin K11S Mutant
    Other atoms: Cl (8); Ca (4);
  23. 4piu (Na: 1) - Crystal Structure of Banana Lectin H84T Mutant
  24. 4pj8 (Na: 1) - Structure of Human MR1-5-Op-Ru in Complex with Human Mait TRBV20 Tcr
  25. 4pj9 (Na: 1) - Structure of Human MR1-5-Op-Ru in Complex with Human Mait TRAJ20 Tcr
  26. 4pje (Na: 2) - Structure of Human MR1-Ac-6-Fp in Complex with Human Mait B-B10 Tcr
    Other atoms: Cl (3);
  27. 4pjh (Na: 4) - Structure of Human MR1-Ac-6-Fp in Complex with Human Mait B-G8 Tcr
  28. 4pji (Na: 1) - Structure of Human MR1-Ac-6-Fp in Complex with Human Mait C-C10 Tcr
  29. 4pk0 (Na: 1) - Crystal Structure of T4 Lysozyme-Peptide in Complex with Teicoplanin- A2-2
    Other atoms: Cl (3);
  30. 4plg (Na: 8) - Crystal Structure of Ancestral Apicomplexan Lactate Dehydrogenase with Oxamate.
  31. 4plh (Na: 2) - Crystal Structure of Ancestral Apicomplexan Malate Dehydrogenase with Oxamate.
  32. 4pme (Na: 1) - Human Transthyretin (Ttr) Complexed with Ferulic Acid and Curcumin.
  33. 4pmf (Na: 1) - Human Transthyretin (Ttr) Complexed with Curcumin
  34. 4pmo (Na: 6) - Crystal Structure of the Mycobacterium Tuberculosis Tat-Secreted Protein RV2525C, Monoclinic Crystal Form I
  35. 4pmr (Na: 1) - Crystal Structure of the Mycobacterium Tuberculosis Tat-Secreted Protein RV2525C in Complex with Hepes (Monoclinic Crystal Form II)
  36. 4pnc (Na: 1) - E. Coli Methionine Aminopeptidase in Complex with Inhibitor 7-Methoxy- 2-Methylen-3,4-Dihydronaphthalen-1(2H)-One
    Other atoms: Co (3);
  37. 4pnz (Na: 1) - Human Dipeptidyl Peptidase IV/CD26 in Complex with the Long-Acting Inhibitor Omarigliptin (Mk-3102)
    Other atoms: F (6);
  38. 4po9 (Na: 1) - Mycobacterium Tuberculosis Reca Glycerol Bound Low Temperature Structure Iic-Br
  39. 4pob (Na: 1) - Crystal Structure of A Thioredoxin RV1471 Ortholog From Mycobacterium Abscessus
  40. 4poc (Na: 1) - Structure of Triosephosphate Isomerase Wild Type Human Enzyme.
    Other atoms: K (2); Br (2);
Page generated: Fri Dec 24 09:46:25 2021

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