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Sodium in PDB 4ph5: Structure of Human Dna Polymerase Beta Complexed with A Nicked Dna Containing A Ac at N-1 Position and Gc at N Position
Enzymatic activity of Structure of Human Dna Polymerase Beta Complexed with A Nicked Dna Containing A Ac at N-1 Position and Gc at N Position
All present enzymatic activity of Structure of Human Dna Polymerase Beta Complexed with A Nicked Dna Containing A Ac at N-1 Position and Gc at N Position:
2.7.7.7;
2.7.7.7;
Protein crystallography data
The structure of Structure of Human Dna Polymerase Beta Complexed with A Nicked Dna Containing A Ac at N-1 Position and Gc at N Position, PDB code: 4ph5
was solved by
M.C.Koag,
S.Lee,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 20.00 / 2.55 |
| Space group | P 1 21 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 50.613, 80.377, 55.294, 90.00, 107.61, 90.00 |
| R / Rfree (%) | 19.1 / 26.1 |
Other elements in 4ph5:
The structure of Structure of Human Dna Polymerase Beta Complexed with A Nicked Dna Containing A Ac at N-1 Position and Gc at N Position also contains other interesting chemical elements:
| Magnesium | (Mg) | 2 atoms |
Sodium Binding Sites:
The binding sites of Sodium atom in the Structure of Human Dna Polymerase Beta Complexed with A Nicked Dna Containing A Ac at N-1 Position and Gc at N Position
(pdb code 4ph5). This binding sites where shown within
5.0 Angstroms radius around Sodium atom.
In total 2 binding sites of Sodium where determined in the Structure of Human Dna Polymerase Beta Complexed with A Nicked Dna Containing A Ac at N-1 Position and Gc at N Position, PDB code: 4ph5:
Jump to Sodium binding site number: 1; 2;
In total 2 binding sites of Sodium where determined in the Structure of Human Dna Polymerase Beta Complexed with A Nicked Dna Containing A Ac at N-1 Position and Gc at N Position, PDB code: 4ph5:
Jump to Sodium binding site number: 1; 2;
Sodium binding site 1 out of 2 in 4ph5
Go back to
Sodium Binding Sites List in 4ph5
Sodium binding site 1 out
of 2 in the Structure of Human Dna Polymerase Beta Complexed with A Nicked Dna Containing A Ac at N-1 Position and Gc at N Position
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 1 of Structure of Human Dna Polymerase Beta Complexed with A Nicked Dna Containing A Ac at N-1 Position and Gc at N Position within 5.0Å range:
|
Sodium binding site 2 out of 2 in 4ph5
Go back to
Sodium Binding Sites List in 4ph5
Sodium binding site 2 out
of 2 in the Structure of Human Dna Polymerase Beta Complexed with A Nicked Dna Containing A Ac at N-1 Position and Gc at N Position
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 2 of Structure of Human Dna Polymerase Beta Complexed with A Nicked Dna Containing A Ac at N-1 Position and Gc at N Position within 5.0Å range:
|
Reference:
M.C.Koag,
S.Lee.
The Spontaneous Base Substitution Mechanisms of Human Dna Polymerase Beta To Be Published.
Page generated: Mon Oct 7 17:42:53 2024
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