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Sodium in PDB, part 65 (files: 2561-2600), PDB 3hwe-3ic9

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 2561-2600 (PDB 3hwe-3ic9).
  1. 3hwe (Na: 4) - Crystal Structure of Siderocalin (Ngal, Lipocalin 2) Complexed with Fe-Bishacam
    Other atoms: Fe (3);
  2. 3hwf (Na: 4) - Crystal Structure of Siderocalin (Ngal, Lipocalin 2) Complexed with Fe-TRENCAM2-Hopo
    Other atoms: Fe (3); Cl (2);
  3. 3hwg (Na: 8) - Crystal Structure of Siderocalin (Ngal, Lipocalin 2) Complexed with Fe-Trencam-HOPO2
    Other atoms: Fe (3); Cl (1);
  4. 3hwt (Na: 1) - Ternary Complex of Dna Polymerase Lambda Bound to A Two Nucleotide Gapped Dna Substrate with A Scrunched Da
    Other atoms: Mg (1);
  5. 3hww (Na: 37) - Crystal Structure of Menaquinone Synthesis Protein Mend From E. Coli in Complex with Oxoglutarate
    Other atoms: Mg (2); Cl (2);
  6. 3hwx (Na: 15) - Crystal Structure of Menaquinone Synthesis Protein Mend From E. Coli in Complex with Thdp
    Other atoms: Mg (8);
  7. 3hx0 (Na: 5) - Ternary Complex of L277A, H511A, R514 Mutant Pol Lambda Bound to A 2 Nucleotide Gapped Dna Substrate with A Scrunched Da
    Other atoms: Mg (4);
  8. 3hya (Na: 4) - Hyaluronic Acid, Molecular Conformations and Interactions in Two Sodium Salts
  9. 3hyi (Na: 1) - Crystal Structure of Full-Length DUF199/Whia From Thermatoga Maritima
  10. 3hyj (Na: 1) - Crystal Structure of the N-Terminal Laglidadg Domain of DUF199/Whia
    Other atoms: Cl (2);
  11. 3hys (Na: 2) - Structure of RV0554 From Mycobacterium Tuberculosis Complexed with Malonic Acid
  12. 3hzn (Na: 4) - Structure of the Salmonella Typhimurium Nfnb Dihydropteridine Reductase
    Other atoms: Cl (12);
  13. 3hzo (Na: 1) - RV0554 From Mycobacterium Tuberculosis - the Structure Solved From the Tetragonal Crystal Form
  14. 3i01 (Na: 4) - Native Structure of Bifunctional Carbon Monoxide Dehydrogenase/Acetyl-Coa Synthase From Moorella Thermoacetica, Water-Bound C-Cluster.
    Other atoms: Ni (8); Fe (56); Cu (4);
  15. 3i04 (Na: 4) - Cyanide-Bound Structure of Bifunctional Carbon Monoxide Dehydrogenase/Acetyl-Coa Synthase From Moorella Thermoacetica, Cyanide-Bound C-Cluster
    Other atoms: Ni (8); Fe (56); Cu (4);
  16. 3i0w (Na: 1) - Crystal Structure of Clostridium Acetobutylicum 8-Oxoguanine Glycosylase/Lyase in Complex with Dsdna Containing Cytosine Opposite to 8-Oxog
  17. 3i0x (Na: 1) - Crystal Structure of Clostridium Acetobutylicum 8-Oxoguanine Glycosylase/Lyase in Complex with Dsdna Containing Adenine Opposite to 8-Oxog
  18. 3i1j (Na: 4) - Structure of A Putative Short Chain Dehydrogenase From Pseudomonas Syringae
    Other atoms: Cl (1);
  19. 3i24 (Na: 19) - Crystal Structure of A Hit Family Hydrolase Protein From Vibrio Fischeri. Northeast Structural Genomics Consortium Target Id VFR176
  20. 3i2w (Na: 3) - Crystal Structure of Efc/F-Bar Domain of Drosophila Syndapin/Pacsin
  21. 3i31 (Na: 3) - Hera Helicase Rna Binding Domain Is An Rrm Fold
    Other atoms: Zn (1);
  22. 3i3b (Na: 16) - E.Coli (Lacz) Beta-Galactosidase (M542A) in Complex with D- Galactopyranosyl-1-on
    Other atoms: Mg (11);
  23. 3i3c (Na: 2) - Crystal Structural of CBX5 Chromo Shadow Domain
  24. 3i3d (Na: 17) - E. Coli (Lacz) Beta-Galactosidase (M542A) in Complex with Iptg
    Other atoms: Mg (13);
  25. 3i3e (Na: 16) - E. Coli (Lacz) Beta-Galactosidase (M542A)
    Other atoms: Mg (15);
  26. 3i44 (Na: 1) - Crystal Structure of Aldehyde Dehydrogenase From Bartonella Henselae at 2.0A Resolution
  27. 3i4q (Na: 2) - Structure of A Putative Inorganic Pyrophosphatase From the Oil-Degrading Bacterium Oleispira Antarctica
  28. 3i55 (Na: 75) - Co-Crystal Structure of Mycalamide A Bound to the Large Ribosomal Subunit
    Other atoms: Sr (108); Mg (93); K (2); Cd (5); Cl (22);
  29. 3i56 (Na: 75) - Co-Crystal Structure of Triacetyloleandomcyin Bound to the Large Ribosomal Subunit
    Other atoms: Sr (108); Mg (93); K (2); Cd (5); Cl (22);
  30. 3i6e (Na: 8) - Crystal Structure of Muconate Lactonizing Enzyme From Ruegeria Pomeroyi.
    Other atoms: Mg (8);
  31. 3i6o (Na: 2) - Crystal Structure of Wild Type Hiv-1 Protease with Macrocyclic Inhibitor Grl-0216A
    Other atoms: I (19);
  32. 3i6v (Na: 1) - Crystal Structure of A Periplasmic His/Glu/Gln/Arg/Opine Family-Binding Protein From Silicibacter Pomeroyi in Complex with Lysine
  33. 3i78 (Na: 1) - 35/99/170/186/220-Loops of Fxa in Sgt
  34. 3i8t (Na: 1) - N-Terminal CRD1 Domain of Mouse Galectin-4 in Complex with Lactose
  35. 3ian (Na: 1) - Crystal Structure of A Chitinase From Lactococcus Lactis Subsp. Lactis
  36. 3iap (Na: 16) - E. Coli (Lacz) Beta-Galactosidase (E416Q)
    Other atoms: Mg (8);
  37. 3iaq (Na: 14) - E. Coli (Lacz) Beta-Galactosidase (E416V)
    Other atoms: Mg (13);
  38. 3iax (Na: 1) - The Crystal Structure of the Tolb Box of Colicin A in Complex with Tolb Reveals Important Differences in the Recruitment of the Common Tolb Translocation Portal Used By Group A Colicins
    Other atoms: Ca (1);
  39. 3ic3 (Na: 1) - Structure of A Putative Pyruvate Dehydrogenase From the Photosynthetic Bacterium Rhodopseudomonas Palustrus CGA009
    Other atoms: K (1);
  40. 3ic9 (Na: 4) - The Structure of Dihydrolipoamide Dehydrogenase From Colwellia Psychrerythraea 34H.
Page generated: Fri Dec 24 09:42:20 2021

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