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Sodium in PDB 3ian: Crystal Structure of A Chitinase From Lactococcus Lactis Subsp. Lactis

Enzymatic activity of Crystal Structure of A Chitinase From Lactococcus Lactis Subsp. Lactis

All present enzymatic activity of Crystal Structure of A Chitinase From Lactococcus Lactis Subsp. Lactis:
3.2.1.14;

Protein crystallography data

The structure of Crystal Structure of A Chitinase From Lactococcus Lactis Subsp. Lactis, PDB code: 3ian was solved by J.B.Bonanno, M.Rutter, K.T.Bain, S.Miller, S.Ozyurt, J.M.Sauder, S.K.Burley, S.C.Almo, New York Sgx Research Center For Structuralgenomics (Nysgxrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 1.75
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 74.771, 74.771, 156.196, 90.00, 90.00, 90.00
R / Rfree (%) 16.9 / 19.2

Sodium Binding Sites:

The binding sites of Sodium atom in the Crystal Structure of A Chitinase From Lactococcus Lactis Subsp. Lactis (pdb code 3ian). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of A Chitinase From Lactococcus Lactis Subsp. Lactis, PDB code: 3ian:

Sodium binding site 1 out of 1 in 3ian

Go back to Sodium Binding Sites List in 3ian
Sodium binding site 1 out of 1 in the Crystal Structure of A Chitinase From Lactococcus Lactis Subsp. Lactis


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of A Chitinase From Lactococcus Lactis Subsp. Lactis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na1

b:15.2
occ:1.00
O A:HOH418 2.3 23.2 1.0
OD1 A:ASN114 2.3 12.6 1.0
O A:GLY153 2.3 12.9 1.0
OD1 A:ASP155 2.4 13.6 1.0
O A:HOH417 2.5 19.1 1.0
O A:HOH470 2.6 17.7 1.0
CG A:ASP155 3.3 13.5 1.0
C A:GLY153 3.4 13.0 1.0
CG A:ASN114 3.4 13.9 1.0
OD2 A:ASP155 3.7 12.7 1.0
NE2 A:HIS358 3.7 21.4 1.0
O A:HOH444 3.7 29.8 1.0
ND2 A:ASN114 3.9 11.9 1.0
CA A:GLY153 3.9 13.0 1.0
O A:HOH467 4.0 27.4 1.0
O A:PHE154 4.3 14.0 1.0
C A:PHE154 4.3 13.3 1.0
CG2 A:ILE110 4.3 12.1 1.0
N A:ASP155 4.4 12.9 1.0
CE1 A:HIS358 4.4 21.6 1.0
N A:PHE154 4.5 14.1 1.0
CB A:ASP155 4.5 12.3 1.0
CA A:ASP155 4.6 12.1 1.0
O A:HOH435 4.6 29.0 1.0
CD2 A:HIS358 4.6 21.6 1.0
CB A:ASN114 4.6 12.4 1.0
CA A:PHE154 4.8 13.5 1.0
O A:HOH35 4.9 15.9 1.0

Reference:

J.B.Bonanno, M.Rutter, K.T.Bain, S.Miller, S.Ozyurt, J.M.Sauder, S.K.Burley, S.C.Almo. Crystal Structure of A Chitinase From Lactococcus Lactis Subsp. Lactis To Be Published.
Page generated: Tue Dec 15 06:14:25 2020

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