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Sodium in PDB 3hzo: RV0554 From Mycobacterium Tuberculosis - the Structure Solved From the Tetragonal Crystal Form

Protein crystallography data

The structure of RV0554 From Mycobacterium Tuberculosis - the Structure Solved From the Tetragonal Crystal Form, PDB code: 3hzo was solved by J.M.Johnston, E.N.Baker, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 2.60
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 100.779, 100.779, 135.112, 90.00, 90.00, 90.00
R / Rfree (%) 16.3 / 22.8

Sodium Binding Sites:

The binding sites of Sodium atom in the RV0554 From Mycobacterium Tuberculosis - the Structure Solved From the Tetragonal Crystal Form (pdb code 3hzo). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the RV0554 From Mycobacterium Tuberculosis - the Structure Solved From the Tetragonal Crystal Form, PDB code: 3hzo:

Sodium binding site 1 out of 1 in 3hzo

Go back to Sodium Binding Sites List in 3hzo
Sodium binding site 1 out of 1 in the RV0554 From Mycobacterium Tuberculosis - the Structure Solved From the Tetragonal Crystal Form


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of RV0554 From Mycobacterium Tuberculosis - the Structure Solved From the Tetragonal Crystal Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na265

b:43.1
occ:1.00
O A:HOH336 2.2 41.3 1.0
O A:LEU226 2.4 23.0 0.7
O A:ALA223 2.6 30.2 1.0
O A:HOH337 2.7 36.3 1.0
O A:GLY229 3.0 29.1 1.0
O A:ASP224 3.4 29.6 1.0
C A:LEU226 3.6 23.0 0.7
C A:ALA223 3.7 30.1 1.0
C A:ASP224 3.9 29.7 1.0
CA A:ASP224 4.0 30.7 1.0
N A:GLY229 4.0 29.6 1.0
C A:GLY229 4.0 29.1 1.0
O A:PRO227 4.2 28.3 1.0
C A:PRO227 4.2 26.8 1.0
N A:ASP224 4.3 30.7 1.0
CA A:GLY229 4.4 29.1 1.0
N A:PRO227 4.5 24.3 1.0
CA A:PRO227 4.5 24.7 1.0
N A:LEU226 4.5 22.1 0.7
CA A:LEU226 4.6 21.5 0.7
N A:ASN228 4.7 28.0 1.0
C A:ALA225 4.9 23.2 0.7
N A:ALA225 4.9 26.5 0.7
CA A:ALA223 4.9 29.0 1.0
C A:ASN228 5.0 30.5 1.0

Reference:

J.M.Johnston, E.N.Baker. The Structure of RV0554 From Mycobacterium Tuberculosis To Be Published.
Page generated: Tue Dec 15 06:13:47 2020

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