Atomistry » Sodium » PDB 3hwe-3ic9 » 3hzo
Atomistry »
  Sodium »
    PDB 3hwe-3ic9 »
      3hzo »

Sodium in PDB 3hzo: RV0554 From Mycobacterium Tuberculosis - the Structure Solved From the Tetragonal Crystal Form

Protein crystallography data

The structure of RV0554 From Mycobacterium Tuberculosis - the Structure Solved From the Tetragonal Crystal Form, PDB code: 3hzo was solved by J.M.Johnston, E.N.Baker, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 2.60
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 100.779, 100.779, 135.112, 90.00, 90.00, 90.00
R / Rfree (%) 16.3 / 22.8

Sodium Binding Sites:

The binding sites of Sodium atom in the RV0554 From Mycobacterium Tuberculosis - the Structure Solved From the Tetragonal Crystal Form (pdb code 3hzo). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the RV0554 From Mycobacterium Tuberculosis - the Structure Solved From the Tetragonal Crystal Form, PDB code: 3hzo:

Sodium binding site 1 out of 1 in 3hzo

Go back to Sodium Binding Sites List in 3hzo
Sodium binding site 1 out of 1 in the RV0554 From Mycobacterium Tuberculosis - the Structure Solved From the Tetragonal Crystal Form


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of RV0554 From Mycobacterium Tuberculosis - the Structure Solved From the Tetragonal Crystal Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na265

b:43.1
occ:1.00
O A:HOH336 2.2 41.3 1.0
O A:LEU226 2.4 23.0 0.7
O A:ALA223 2.6 30.2 1.0
O A:HOH337 2.7 36.3 1.0
O A:GLY229 3.0 29.1 1.0
O A:ASP224 3.4 29.6 1.0
C A:LEU226 3.6 23.0 0.7
C A:ALA223 3.7 30.1 1.0
C A:ASP224 3.9 29.7 1.0
CA A:ASP224 4.0 30.7 1.0
N A:GLY229 4.0 29.6 1.0
C A:GLY229 4.0 29.1 1.0
O A:PRO227 4.2 28.3 1.0
C A:PRO227 4.2 26.8 1.0
N A:ASP224 4.3 30.7 1.0
CA A:GLY229 4.4 29.1 1.0
N A:PRO227 4.5 24.3 1.0
CA A:PRO227 4.5 24.7 1.0
N A:LEU226 4.5 22.1 0.7
CA A:LEU226 4.6 21.5 0.7
N A:ASN228 4.7 28.0 1.0
C A:ALA225 4.9 23.2 0.7
N A:ALA225 4.9 26.5 0.7
CA A:ALA223 4.9 29.0 1.0
C A:ASN228 5.0 30.5 1.0

Reference:

J.M.Johnston, E.N.Baker. The Structure of RV0554 From Mycobacterium Tuberculosis To Be Published.
Page generated: Mon Oct 7 10:30:49 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy