Sodium in PDB, part 301 (files: 12001-12040),
PDB 9b1u-9end
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 12001-12040 (PDB 9b1u-9end).
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9b1u (Na: 2) - Crystal Structure of Pqqt with Pqq Bound
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9b1z (Na: 2) - Crystal Structure of Adp-Ribose Diphosphatase From Klebsiella Pneumoniae (Apo)
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9b74 (Na: 7) - Crystal Structure of Humanized 44H10 Fab Version 14
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9b7c (Na: 1) - High-Resolution Ambient Temperature Structure of Lysozyme Soaked with Sodium Iodide
Other atoms:
I (3);
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9b7e (Na: 4) - S_SAD Structure of Hewl Using Lossy Compression Data with A Compression Ratio of 422
Other atoms:
Cl (8);
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9b7f (Na: 4) - S_SAD Structure of Hewl Using Lossless Default Compression
Other atoms:
Cl (8);
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9b8u (Na: 2) - Crystal Structure of Crx-RET4 Oligonucleotide Complex
Other atoms:
As (2);
K (3);
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9bcz (Na: 1) - Chicken 1-Phosphatidylinositol 4,5-Bisphosphate Phosphodiesterase Zeta-1 (PLCZ1) in Complex with Calcium and Phosphorylated Threonine
Other atoms:
Cl (2);
Ca (1);
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9bfj (Na: 1) - Cryo-Em Structure of Human CHT1 in the Choline Bound State
Other atoms:
Cl (1);
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9bnh (Na: 2) - X-Ray Crystal Structure of Cu-TZ4H Tryptophan Zipper Metallo-Peptide
Other atoms:
Cu (2);
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9bs5 (Na: 2) - Bacteroides Ovatus GH97C Sus
Other atoms:
Ca (2);
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9btx (Na: 2) - Structure of Human Mait A-F7 Tcr in Complex with Human MR1-3,4- Dihydroxybenzaldehyde
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9btz (Na: 1) - Structure of Human Mait A-F7 Tcr in Complex with Human MR1- Nicotinaldehyde
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9bw8 (Na: 1) - Structure of P450BLT From Micromonospora Sp. Mw-13 in Complex with Fluorinated Biarylitide
Other atoms:
F (16);
Fe (3);
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9c46 (Na: 1) - Right-Left Hybrid Parallel G-Quadruplex From SLC2A1 Promoter
Other atoms:
K (4);
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9c50 (Na: 2) - Replacement of A Single Residue Changes the Primary Specificity of Thrombin
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9c6e (Na: 1) - High-Resolution Structure of Bovine (3-367)Arrestin-1 in A Pre- Activated Conformation
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9c6k (Na: 2) - Cryo-Em Structure of the Tpp Riboswitch Embedded in An Rna Scaffold Bound to Thiamine Pyrophosphate
Other atoms:
Mg (6);
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9c6l (Na: 5) - Yasminevirus C12ORF29, A 5' to 3' Rna Ligase
Other atoms:
Mg (6);
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9c74 (Na: 3) - Superfolder Green Fluorescent Protein with Meta-Nitro-Tyrosine Incorporated at Position 66
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9c7a (Na: 2) - Crystal Structure of R149W Neurodevelopmental Disease-Associated U2AF2 Variant
Other atoms:
Br (1);
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9cgs (Na: 1) - Structure of Human Mait A-F7 Tcr in Complex with Human MR1-Pyridoxal- 5'-Phosphate
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9cip (Na: 7) - Microed Structure of the C11 Cysteine Protease Clostripain
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9cld (Na: 6) - Crystal Structure of Maltose Binding Protein (Apo)
Other atoms:
Cd (4);
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9crn (Na: 1) - Crystal Structure of Streptococcus Pyogenes Tgla
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9d66 (Na: 9) - Human Excitatory Amino Acid Transporter 3 (EAAT3) with Bound L- Aspartate in An Intermediate Outward Facing State
Other atoms:
Hg (3);
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9d67 (Na: 9) - Human Excitatory Amino Acid Transporter 3 (EAAT3) with Bound D- Aspartate in An Intermediate Outward Facing State
Other atoms:
Hg (3);
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9d68 (Na: 2) - Human Excitatory Amino Acid Transporter 3 (EAAT3) with Bound L- Cysteine in An Outward Facing State
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9d69 (Na: 3) - Human Excitatory Amino Acid Transporter 3 (EAAT3) with Bound L- Cysteine in An Intermediate Outward Facing State (Slight Upper Position)
Other atoms:
Hg (1);
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9d6a (Na: 3) - Human Excitatory Amino Acid Transporter 3 (EAAT3) with Bound L- Cysteine in An Intermediate Outward Facing State
Other atoms:
Hg (1);
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9dam (Na: 1) - A Darpin Fused to the 1TEL Crystallization Chaperone Via A Direct Helical Fusion
Other atoms:
Cl (3);
Mg (2);
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9db5 (Na: 8) - A Darpin Fused to the 1TEL Crystallization Chaperone Via A Proline- Alanine Linker
Other atoms:
Cl (1);
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9dk1 (Na: 1) - Lexapeptide Dehydratase Complex Lxmky Apo
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9dk3 (Na: 1) - Lexapeptide Dehydratase Complex Lxmky, Hydrolysed Atp Bound
Other atoms:
Mg (2);
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9dk4 (Na: 7) - Ancestral Hydroxynitrile Lyase with Fifteen Substitutions
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9doc (Na: 5) - The Von Willebrand Factor A Domain of Human Capillary Morphogenesis Gene II, Flexibly Fused to the 1TEL Crystallization Chaperone, Thr- Val Linker Variant, at 1.2 Angstrom Resolution
Other atoms:
Mg (7);
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9dpm (Na: 3) - Bmp-9 Monomer Growth Factor with Cysteinylation
Other atoms:
Cl (3);
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9dw6 (Na: 2) - Crystal Structure of Sars-Cov-2 Main Protease (Mpro) C145A Mutant in Complex with Peptide From Human Trna Methyltransferase TRMT1
Other atoms:
Cl (1);
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9e9g (Na: 5) - Heligmosomoides Polygyrus Tgf-Beta Mimic 6 Domain 3 (TGM6-D3) Bound to Human Tgf-Beta Type II Receptor Extracellular Domain
Other atoms:
As (2);
Cl (2);
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9end (Na: 2) - Crystal Structure of Methanopyrus Kandleri Malate Dehydrogenase Mutant 3
Other atoms:
Cl (1);
Page generated: Sat Feb 8 23:50:16 2025
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