Sodium in PDB 9c0e: Phosphorylated Human NKCC1_K289NA492E in Complex with Furosemide
Other elements in 9c0e:
The structure of Phosphorylated Human NKCC1_K289NA492E in Complex with Furosemide also contains other interesting chemical elements:
Sodium Binding Sites:
The binding sites of Sodium atom in the Phosphorylated Human NKCC1_K289NA492E in Complex with Furosemide
(pdb code 9c0e). This binding sites where shown within
5.0 Angstroms radius around Sodium atom.
In total 2 binding sites of Sodium where determined in the
Phosphorylated Human NKCC1_K289NA492E in Complex with Furosemide, PDB code: 9c0e:
Jump to Sodium binding site number:
1;
2;
Sodium binding site 1 out
of 2 in 9c0e
Go back to
Sodium Binding Sites List in 9c0e
Sodium binding site 1 out
of 2 in the Phosphorylated Human NKCC1_K289NA492E in Complex with Furosemide
 Mono view
 Stereo pair view
|
A full contact list of Sodium with other atoms in the Na binding
site number 1 of Phosphorylated Human NKCC1_K289NA492E in Complex with Furosemide within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Na1305
b:72.4
occ:1.00
|
O
|
A:TRP300
|
1.8
|
41.2
|
1.0
|
O
|
A:LEU297
|
2.2
|
45.6
|
1.0
|
OG
|
A:SER614
|
2.3
|
50.8
|
1.0
|
O
|
A:ALA610
|
2.4
|
55.0
|
1.0
|
OG
|
A:SER613
|
2.6
|
47.4
|
1.0
|
C
|
A:TRP300
|
3.0
|
41.3
|
1.0
|
CB
|
A:SER614
|
3.1
|
40.8
|
1.0
|
N
|
A:SER614
|
3.1
|
43.5
|
1.0
|
C
|
A:ALA610
|
3.4
|
44.0
|
1.0
|
C
|
A:LEU297
|
3.4
|
31.9
|
1.0
|
CA
|
A:SER614
|
3.5
|
40.3
|
1.0
|
CA
|
A:ALA610
|
3.8
|
31.6
|
1.0
|
N
|
A:GLY301
|
3.9
|
46.1
|
1.0
|
CA
|
A:GLY301
|
3.9
|
47.3
|
1.0
|
CB
|
A:SER613
|
3.9
|
34.2
|
1.0
|
C
|
A:SER613
|
4.0
|
44.6
|
1.0
|
CA
|
A:TRP300
|
4.0
|
36.9
|
1.0
|
CA
|
A:LEU297
|
4.2
|
31.2
|
1.0
|
CB
|
A:TRP300
|
4.3
|
31.0
|
1.0
|
N
|
A:TRP300
|
4.3
|
41.6
|
1.0
|
CB
|
A:ALA610
|
4.3
|
29.2
|
1.0
|
O
|
A:ASN298
|
4.3
|
35.2
|
1.0
|
N
|
A:ASN298
|
4.4
|
31.0
|
1.0
|
CA
|
A:SER613
|
4.5
|
35.6
|
1.0
|
C
|
A:ASN298
|
4.5
|
30.2
|
1.0
|
N
|
A:THR611
|
4.5
|
41.0
|
1.0
|
CA
|
A:ASN298
|
4.5
|
31.8
|
1.0
|
CB
|
A:LEU297
|
4.8
|
39.7
|
1.0
|
N
|
A:SER613
|
4.8
|
37.1
|
1.0
|
O
|
A:SER613
|
4.9
|
44.4
|
1.0
|
CA
|
A:THR611
|
4.9
|
41.0
|
1.0
|
O
|
A:SER609
|
4.9
|
42.6
|
1.0
|
C
|
A:SER614
|
5.0
|
41.3
|
1.0
|
|
Sodium binding site 2 out
of 2 in 9c0e
Go back to
Sodium Binding Sites List in 9c0e
Sodium binding site 2 out
of 2 in the Phosphorylated Human NKCC1_K289NA492E in Complex with Furosemide
 Mono view
 Stereo pair view
|
A full contact list of Sodium with other atoms in the Na binding
site number 2 of Phosphorylated Human NKCC1_K289NA492E in Complex with Furosemide within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Na1305
b:76.2
occ:1.00
|
O
|
B:TRP300
|
2.1
|
41.7
|
1.0
|
O
|
B:ALA610
|
2.1
|
53.8
|
1.0
|
OG
|
B:SER614
|
2.2
|
47.5
|
1.0
|
O
|
B:LEU297
|
2.4
|
41.7
|
1.0
|
OG
|
B:SER613
|
2.5
|
44.0
|
1.0
|
N
|
B:SER614
|
3.0
|
40.8
|
1.0
|
C
|
B:ALA610
|
3.1
|
44.3
|
1.0
|
CB
|
B:SER614
|
3.2
|
39.8
|
1.0
|
C
|
B:TRP300
|
3.3
|
41.4
|
1.0
|
CA
|
B:SER614
|
3.5
|
38.5
|
1.0
|
CA
|
B:ALA610
|
3.5
|
31.5
|
1.0
|
C
|
B:LEU297
|
3.5
|
30.0
|
1.0
|
CB
|
B:SER613
|
3.8
|
31.4
|
1.0
|
C
|
B:SER613
|
3.8
|
43.5
|
1.0
|
CA
|
B:GLY301
|
4.1
|
48.8
|
1.0
|
CB
|
B:ALA610
|
4.1
|
29.3
|
1.0
|
N
|
B:GLY301
|
4.1
|
48.4
|
1.0
|
CA
|
B:SER613
|
4.2
|
33.6
|
1.0
|
N
|
B:THR611
|
4.3
|
41.9
|
1.0
|
CA
|
B:LEU297
|
4.3
|
29.9
|
1.0
|
CA
|
B:TRP300
|
4.3
|
37.7
|
1.0
|
N
|
B:SER613
|
4.5
|
35.2
|
1.0
|
CB
|
B:TRP300
|
4.5
|
28.5
|
1.0
|
N
|
B:ASN298
|
4.6
|
30.9
|
1.0
|
O
|
B:SER609
|
4.6
|
39.7
|
1.0
|
O
|
B:ASN298
|
4.6
|
35.1
|
1.0
|
N
|
B:TRP300
|
4.6
|
40.5
|
1.0
|
CA
|
B:ASN298
|
4.7
|
31.8
|
1.0
|
CA
|
B:THR611
|
4.7
|
41.3
|
1.0
|
O
|
B:SER613
|
4.7
|
45.5
|
1.0
|
C
|
B:ASN298
|
4.7
|
29.5
|
1.0
|
CB
|
B:LEU297
|
4.8
|
39.5
|
1.0
|
N
|
B:ALA610
|
4.8
|
39.8
|
1.0
|
C
|
B:THR611
|
4.8
|
38.4
|
1.0
|
O
|
B:THR611
|
4.9
|
41.0
|
1.0
|
C
|
B:SER614
|
4.9
|
39.5
|
1.0
|
CD1
|
B:LEU442
|
5.0
|
43.5
|
1.0
|
CD2
|
B:LEU297
|
5.0
|
34.1
|
1.0
|
|
Reference:
Y.Zhao,
P.Vidossich,
B.Forbush,
J.Ma,
J.Rinehart,
M.De Vivo,
E.Cao.
Structural Basis For Human NKCC1 Inhibition By Loop Diuretic Drugs Embo J. 2025.
ISSN: ESSN 1460-2075
DOI: 10.1038/S44318-025-00368-6
Page generated: Tue Feb 25 11:43:27 2025
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