Sodium in PDB 8zqq: Human High-Affinity Choline Transporter CHT1 Bound to Choline Under Nacl Condition, with Sodium and Chloride Ions Coordinated.

The structure of Human High-Affinity Choline Transporter CHT1 Bound to Choline Under Nacl Condition, with Sodium and Chloride Ions Coordinated. also contains other interesting chemical elements:

Chlorine

(Cl)

1 atom

The binding sites of Sodium atom in the Human High-Affinity Choline Transporter CHT1 Bound to Choline Under Nacl Condition, with Sodium and Chloride Ions Coordinated. (pdb code 8zqq). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Human High-Affinity Choline Transporter CHT1 Bound to Choline Under Nacl Condition, with Sodium and Chloride Ions Coordinated., PDB code: 8zqq:

Sodium binding site 1 out of 1 in the Human High-Affinity Choline Transporter CHT1 Bound to Choline Under Nacl Condition, with Sodium and Chloride Ions Coordinated.


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Human High-Affinity Choline Transporter CHT1 Bound to Choline Under Nacl Condition, with Sodium and Chloride Ions Coordinated. within 5.0Å range: probe atom residue distance (Å) B Occ A:Na602 b:34.7 occ:1.00 O A:VAL63 2.2 37.4 1.0 OG A:SER346 2.3 38.1 1.0 O A:ALA60 2.3 34.3 1.0 O A:ALA343 2.7 33.8 1.0 OG A:SER347 3.0 35.9 1.0 CB A:SER346 3.2 29.1 1.0 N A:SER347 3.3 36.0 1.0 C A:VAL63 3.4 30.2 1.0 C A:ALA60 3.5 30.9 1.0 C A:ALA343 3.6 28.8 1.0 C A:SER346 3.6 36.1 1.0 CA A:ALA343 3.7 28.5 1.0 CB A:SER347 3.8 36.1 1.0 CA A:SER346 3.9 30.3 1.0 CA A:SER347 3.9 31.6 1.0 CA A:GLY64 4.0 20.7 1.0 N A:GLY64 4.2 27.1 1.0 O A:SER346 4.3 41.4 1.0 CA A:ALA60 4.3 27.6 1.0 CB A:ALA343 4.3 29.0 1.0 N A:SER346 4.3 36.1 1.0 O A:THR61 4.4 34.1 1.0 CA A:VAL63 4.5 28.2 1.0 N A:VAL63 4.5 33.7 1.0 O A:ALA342 4.5 39.2 1.0 N A:THR61 4.5 33.4 1.0 C A:THR61 4.6 28.3 1.0 CA A:THR61 4.7 28.2 1.0 N A:VAL344 4.8 39.0 1.0 CB A:ALA60 4.9 34.6 1.0 CD1 A:ILE195 4.9 38.7 1.0 N A:ALA343 4.9 25.9 1.0 CB A:VAL63 5.0 26.9 1.0

Y.Qiu, Y.Gao. Ion Coupling and Inhibitory Mechanisms of the Human Presynaptic High-Affinity Choline Transporter CHT1 Structure 2024.
ISSN: ISSN 0969-2126
DOI: 10.1016/J.STR.2024.11.009