Sodium in PDB, part 278 (files: 11081-11120),
PDB 8g2e-8h58
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 11081-11120 (PDB 8g2e-8h58).
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8g2e (Na: 1) - PKM2 Bound to Compound 2
Other atoms:
Mg (1);
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8g2h (Na: 1) - Crystal Structure of PRMT4 with Compound YD1113
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8g62 (Na: 2) - Papain-Like Protease of Sars Cov-2 in Complex with Remodilin Ncgc 390004
Other atoms:
Cl (6);
Zn (3);
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8g8a (Na: 4) - Crystal Structure of DH1317.8 Fab in Complex with Hiv Proximal Mper Peptide
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8g8d (Na: 10) - Crystal Structure of DH1346 Fab in Complex with Hiv Proximal Mper Peptide
Other atoms:
F (1);
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8g8v (Na: 2) - Gtp Cyclohydrolase-Ib with Sodium
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8gbt (Na: 2) - Time-Resolve Sfx Structure of A Photoproduct of Carbon Monoxide Complex of Bovine Cytochrome C Oxidase
Other atoms:
Cu (6);
Fe (4);
Zn (2);
Mg (2);
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8gcq (Na: 2) - Sfx Structure of Oxidized Cytochrome C Oxidase at 2.38 Angstrom Resolution
Other atoms:
Mg (2);
Cu (6);
Zn (2);
Fe (4);
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8gdt (Na: 1) - Heligmosomoides Polygyrus Tgf-Beta Mimic 6 Domain 3 (TGM6-D3) Bound to Human Tgf-Beta Type II Receptor Extracellular Domain
Other atoms:
As (3);
Cl (1);
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8gf8 (Na: 2) - Cryo-Em Structure of Human TRPV1 in CNW11 Nanodisc and Soybean Lipids
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8gf9 (Na: 2) - Cryo-Em Structure of Human TRPV1 in CNW11 Nanodisc and Popc:Pope:Popg Lipids
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8gfa (Na: 2) - Cryo-Em Structure of Human TRPV1 in Complex with the Analgesic Drug Sb-366791
Other atoms:
Cl (4);
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8ghf (Na: 4) - Cryo-Em Structure of HSLO1 in Plasma Membrane Vesicles
Other atoms:
Mg (4);
Ca (8);
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8gi8 (Na: 1) - Kalium Channelrhodopsin 1 From Hyphochytrium Catenoides (HCKCR1) Embedded in Peptidisc
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8gi9 (Na: 3) - Cation Channelrhodopsin From Hyphochytrium Catenoides (Hcccr) Embedded in Peptidisc
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8gka (Na: 1) - Human TRPV3 Tetramer Structure, Closed Conformation
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8gkm (Na: 1) - A1 Leu Graft + Leu: Adenylation Domain 1 Core Construct From Teicoplanin Biosynthesis, Leucine Selection Pocket Graft; Leucine Bound
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8gko (Na: 1) - Crystal Structure Analysis of Aspergillus Fumigatus Alkaline Protease
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8gkp (Na: 3) - Crystal Structure Analysis of Aspergillus Fumigatus Alkaline Protease
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8glh (Na: 1) - Crystal Structure of Human CD1B in Complex with Endogenous Pc C40:5
Other atoms:
I (3);
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8gmv (Na: 1) - Crystal Structure of Lysozyme
Other atoms:
Cl (3);
-
8gmw (Na: 1) - Crystal Structure of Lysozyme
Other atoms:
Cl (4);
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8gn9 (Na: 1) - Spfh Domain of Pyrococcus Horikoshii Stomatin
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8gne (Na: 1) - Crystal Structure of Human Adenosine A2A Receptor in Complex with An Insurmountable Inverse Agonist, Kw-6356.
-
8gnk (Na: 1) - Cryoem Structure of Cytosol-Facing, Substrate-Bound RATGAT1
Other atoms:
Cl (1);
-
8gpc (Na: 1) - Crystal Structure of Ndm-1 at PH5.5 (Succinate) in Complex with Hydrolyzed Ampicillin
Other atoms:
Zn (4);
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8gpz (Na: 1) - Crystal Structure of BRD4 Bromodomain 1 (BD1) in Complex with C239- 0012
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8gq0 (Na: 2) - Crystal Structure of BRD4 Bromodomain 1 (BD1) in Complex with STL233497
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8gqz (Na: 1) - Crystal Structure of Mitochondrial Citrate Synthase (CIT1) From Saccharomyces Cerevisiae
Other atoms:
Cl (5);
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8gr6 (Na: 2) - Crystal Structure of Pilus-Specific Sortase C From Streptococcus Sanguinis
Other atoms:
Zn (1);
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8gsg (Na: 1) - T3R3 Form of Human Insulin with Single Zn
Other atoms:
Cl (1);
Zn (1);
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8gt0 (Na: 25) - Structure of Falcipain and Human Stefin A Complex
Other atoms:
Cl (1);
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8gt7 (Na: 44) - Structure of Falcipain and Human Stefin A Mutant Complex
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8gvm (Na: 4) - The Structure of Azide-Bound Cytochrome C Oxidase Determined Using the Crystals Exposed to 20 Mm Azide Solution For 4 Days
Other atoms:
Cu (6);
Zn (2);
Fe (6);
Mg (2);
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8gyr (Na: 5) - Crystal Structure of A Variable Region Segment of Leptospira Host- Interacting Outer Surface Protein, Liga
Other atoms:
Ca (2);
Cl (1);
K (5);
I (2);
-
8gz1 (Na: 2) - Cryo-Em Structure of Human NAV1.6/BETA1/BETA2,Apo State
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8h1b (Na: 1) - Crystal Structure of Mnmm From S. Aureus Complexed with Sam and Trna Anti-Codon Stem Loop (Asl) (1.55 A)
-
8h1g (Na: 1) - The R406T Mutant Form of the Aquifex Aeolicus Mutl Endonuclease Domain
Other atoms:
Cd (4);
-
8h2b (Na: 2) - Crystal Structure of Alcohol Dehydrogenase From Zobellia Galactanivorans
Other atoms:
Zn (8);
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8h58 (Na: 15) - Crystal Structure of Yhaj Effector Binding Domain
Page generated: Wed Nov 13 13:07:51 2024
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