Sodium in PDB, part 264 (files: 10521-10560),
PDB 7xft-7ypy
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 10521-10560 (PDB 7xft-7ypy).
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7xft (Na: 5) - Mucp PDZ2 Domain
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7xjb (Na: 1) - Rat-Comt, Opicapone,Sam and Mg Bond
Other atoms:
Mg (4);
Cl (13);
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7xjv (Na: 5) - Crystal Structure of Alpha-1,3-Mannosyltransferase MNT2 From Saccharomyces Cerevisiae, Mn/Gdp-Mannose Form
Other atoms:
Mn (4);
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7xk9 (Na: 1) - Structure of Human BETA2 Adrenergic Receptor Bound to Constrained Isoproterenol
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7xka (Na: 1) - Structure of Human BETA2 Adrenergic Receptor Bound to Constrained Epinephrine
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7xld (Na: 1) - Crystal Structure of Isdh Linker-NEAT3 Bound to A Nanobody (Vhh)
Other atoms:
Mg (1);
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7xma (Na: 2) - Crystal Structure of Bovine Heart Cytochrome C Oxidase, Apo Structure with Dmso
Other atoms:
Fe (4);
Zn (2);
Cu (6);
Mg (2);
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7xmb (Na: 2) - Crystal Structure of Bovine Heart Cytochrome C Oxidase, the Structure Complexed with An Allosteric Inhibitor T113
Other atoms:
Mg (2);
Fe (4);
Cu (6);
Zn (2);
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7xoi (Na: 8) - Aspergillus Sojae Alpha-Glucosidase Asojagdl in Complex with Trehalose
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7xq7 (Na: 1) - The Complex Structure of Wt-Mpro
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7xsf (Na: 2) - Crystal Structure of CLAGL29A
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7xsg (Na: 2) - Crystal Structure of CLAGL29B
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7xsh (Na: 2) - Crystal Structure of CLAGL29B Bound with L-Glucose
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7xts (Na: 2) - The Apo Structure of the Engineered Tfcut S130A
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7xtt (Na: 2) - The Structure of Engineered Tfcut S130A in Complex with Mhet
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7xu8 (Na: 1) - Structure of the Complex of Camel Peptidoglycan Recognition Protein- Short (Pgrp-S) with Heptanoic Acid at 2.15 A Resolution.
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7xxk (Na: 2) - Crystal Structure of Sars-Cov-2 N-Ctd in Complex with Gmp
Other atoms:
K (9);
Cl (13);
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7xyr (Na: 9) - Cystal Structure of Beta-Glucuronidase From Bacteroides Thetaiotaomicron
Other atoms:
Mg (22);
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7y44 (Na: 4) - Re-Refinement of Damage Free X-Ray Structure of Bovine Cytochrome C Oxidase at 1.9 Angstrom Resolution
Other atoms:
Cu (6);
Zn (2);
Fe (4);
Mg (2);
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7y52 (Na: 2) - Crystal Structure of Peptidyl-Trna Hydrolase From Enterococcus Faecium
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7y6i (Na: 4) - Cryo-Em Structure of Human Sodium-Chloride Cotransporter
Other atoms:
Cl (4);
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7y7w (Na: 2) - Cryo-Em Structure of Human Gaba Transporter GAT1 Bound with Gaba in Nacl Solution in An Inward-Occluded State at 2.4 Angstrom
Other atoms:
Cl (1);
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7y7y (Na: 2) - Cryo-Em Structure of Human Gaba Transporter GAT1 Bound with Nipecotic Acid in Nacl Solution in An Inward-Occluded State at 2.4 Angstrom
Other atoms:
Cl (1);
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7y8s (Na: 3) - Crystal Structure of Sdscam FNIII1-3 Domains, Isoform BETA2V6
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7y94 (Na: 2) - Crystal Structure of Escherichia Coli Adenine Phosphoribosyltransferase (Aprt) in Complex with Adenine
Other atoms:
Cl (5);
-
7y95 (Na: 8) - Crystal Structure of Sdscam IG1 Domain, Isoform BETA6V2
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7y9h (Na: 3) - Crystal Structure of Diterpene Synthase Vena From Streptomyces Venezuelae Atcc 15439
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7ya4 (Na: 1) - Formate Dehydrogenase From Novosphingobium Sp. AP12 with Nad and Azide
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7ya9 (Na: 1) - FIS1 (Mitochondrial Fission 1 Protein)
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7ybg (Na: 2) - Crystal Structure of the Sars-Cov-2 Papain-Like Protease (C111S Mutant)
Other atoms:
Cl (1);
Zn (1);
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7yf7 (Na: 135) - uc(Nmr) Solution Structures of the Dna Minidumbbell Formed By Two Atttt Repeats
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7ygi (Na: 2) - Crystal Structure of P53 Dbd Domain in Complex with Azurin
Other atoms:
Zn (2);
K (2);
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7ykb (Na: 1) - Neutron Structure of Pcya D105N Mutant Complexed with Biliverdin at Room Temperature
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7ymg (Na: 2) - Crystal Structure of BRD4 Bromodomain 1 (BD1) in Complex with 2-({3- Ethyl-[1,2,4]Triazolo[4,3-B]Pyridazin-6-Yl}Amino)-3-(1H-Indol-3-Yl) Propan-1-Ol
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7yne (Na: 2) - Crystal Structure of Fragmin Domain-1 (1-160) in Complex with G-Form Actin
Other atoms:
Ca (12);
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7ynh (Na: 2) - Catalytic Intermediate of Copper Amine Oxidase Determined By Serial Femtosecond X-Ray Crystallography Using A Single-Flow Liquid Jet System
Other atoms:
Cu (2);
-
7ynu (Na: 1) - Crystal Structure of Hen Egg White Lysozyme Introduced with O-(2- Nitrobenzyl)-L-Tyrosine
Other atoms:
Cl (5);
-
7ynv (Na: 1) - Crystal Structure of Photolysed Hen Egg White Lysozyme Introduced with O-(2-Nitrobenzyl)-L-Tyrosine
Other atoms:
Cl (5);
-
7ynx (Na: 12) - Crystal Structure of PIRH2 Bound to Poly-Ala Peptide
Other atoms:
Zn (16);
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7ypy (Na: 2) - Bovine Heart Cytochrome C Oxidase in Fully Oxidized State at 1.5 Angstrom Resolution
Other atoms:
Mg (2);
Zn (2);
Cu (6);
Fe (4);
Page generated: Wed Nov 13 13:07:19 2024
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