Sodium in PDB, part 264 (files: 10521-10560),
PDB 7ya9-7zb1
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 10521-10560 (PDB 7ya9-7zb1).
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7ya9 (Na: 1) - FIS1 (Mitochondrial Fission 1 Protein)
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7ybg (Na: 2) - Crystal Structure of the Sars-Cov-2 Papain-Like Protease (C111S Mutant)
Other atoms:
Cl (1);
Zn (1);
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7yf7 (Na: 135) - uc(Nmr) Solution Structures of the Dna Minidumbbell Formed By Two Atttt Repeats
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7ygi (Na: 2) - Crystal Structure of P53 Dbd Domain in Complex with Azurin
Other atoms:
Zn (2);
K (2);
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7ykb (Na: 1) - Neutron Structure of Pcya D105N Mutant Complexed with Biliverdin at Room Temperature
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7ymg (Na: 2) - Crystal Structure of BRD4 Bromodomain 1 (BD1) in Complex with 2-({3- Ethyl-[1,2,4]Triazolo[4,3-B]Pyridazin-6-Yl}Amino)-3-(1H-Indol-3-Yl) Propan-1-Ol
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7yne (Na: 2) - Crystal Structure of Fragmin Domain-1 (1-160) in Complex with G-Form Actin
Other atoms:
Ca (12);
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7ynh (Na: 2) - Catalytic Intermediate of Copper Amine Oxidase Determined By Serial Femtosecond X-Ray Crystallography Using A Single-Flow Liquid Jet System
Other atoms:
Cu (2);
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7ynu (Na: 1) - Crystal Structure of Hen Egg White Lysozyme Introduced with O-(2- Nitrobenzyl)-L-Tyrosine
Other atoms:
Cl (5);
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7ynv (Na: 1) - Crystal Structure of Photolysed Hen Egg White Lysozyme Introduced with O-(2-Nitrobenzyl)-L-Tyrosine
Other atoms:
Cl (5);
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7ynx (Na: 12) - Crystal Structure of PIRH2 Bound to Poly-Ala Peptide
Other atoms:
Zn (16);
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7ypy (Na: 2) - Bovine Heart Cytochrome C Oxidase in Fully Oxidized State at 1.5 Angstrom Resolution
Other atoms:
Mg (2);
Zn (2);
Cu (6);
Fe (4);
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7ypz (Na: 1) - Zafirlukast in Complex with CRM1-Ran-RANBP1
Other atoms:
Mg (1);
Cl (4);
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7yq0 (Na: 1) - Crystal Structure of Adenosine 5'-Phosphosulfate Kinase From Archaeoglobus Fulgidus in Complex with Adp
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7yqn (Na: 2) - Crystal Structure of Ecoli Malate Synthase G
Other atoms:
Cl (3);
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7yqs (Na: 1) - Neutron Structure of A L-Rhamnose-Alpha-1,4-D-Glucuronate Lyase From Fusarium Oxysporum 12S, L-Rha Complex
Other atoms:
Ca (1);
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7yrk (Na: 3) - Crystal Structure of the Hen Egg Lysozyme-2-Oxidobenzylidene- Threoninato-Copper (II) Complex
Other atoms:
Cl (4);
Cu (1);
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7ytw (Na: 4) - Structural Basis of Vitamin C Recognition and Transport By Mammalian SVCT1 Transporter
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7yu0 (Na: 3) - Structure of 6-Aminohexanoate-Oligomer Hydrolase Nylc Precursor, H130Y/N266A/T267A Mutant
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7yu1 (Na: 3) - Structure of 6-Aminohexanoate-Oligomer Hydrolase Nylc Precursor, D122G/H130Y/T267C Mutant
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7yx0 (Na: 1) - Crystal Structure of the Full-Length Short Lov Protein SBW25-Lov From Pseudomonas Fluorescens (Light State)
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7yxd (Na: 1) - Crystal Structure of Wt ANCGR2-Lbd Bound to Dexamethasone and Shp Coregulator Fragment
Other atoms:
F (4);
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7yxe (Na: 1) - Crystal Structure of YTHDF2 with Compound ZA_143
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7yyg (Na: 1) - Crystal Structure of Gatekeeper of Type III Secretion System in Bordetella Bopn
Other atoms:
Ca (1);
Cl (1);
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7yzn (Na: 1) - Structure of C-Terminally Truncated AIF5B From Pyrococcus Abyssi Complexed with Gtp
Other atoms:
Mg (1);
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7yzx (Na: 1) - Scpa From Streptococcus Pyogenes, D783A Mutant.
Other atoms:
Ca (1);
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7z05 (Na: 1) - White Bream Virus N7-Methyltransferase
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7z2k (Na: 1) - Crystal Structure of Sars-Cov-2 Main Protease in Orthorhombic Space Group P212121
Other atoms:
Cl (2);
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7z3f (Na: 2) - Crystal Structure of the Cupredoxin Acop From Acidithiobacillus Ferrooxidans, Oxidized Form
Other atoms:
Cu (2);
Cl (2);
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7z3u (Na: 2) - Crystal Structure of Sars-Cov-2 Main Protease After Incubation with Sulfo-Calpeptin
Other atoms:
Cl (2);
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7z50 (Na: 2) - Structure of the Highly Diabetogenic 4.1-T Cell Receptor Targeting A Hybrid Insulin Peptide Bound to I-AG7.
Other atoms:
Cl (1);
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7z67 (Na: 1) - Crystal Structure of the Tandem Kinase & Triphosphate Tunnel Metalloenzyme Domain Module of the TTM1 Protein From Arabidoposis Thaliana in Complex with A Adenosine Nucleotide Analog.
Other atoms:
Mg (1);
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7z6b (Na: 6) - Pet Hydrolase PET6 From Halophilic Organsim Vibrio Gazogenes
Other atoms:
Cl (3);
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7z6j (Na: 1) - X-Ray Structure of the Adduct Obtained Upon Reaction of [RH2(OCOCH3) (OCOCF3)3] with Hewl
Other atoms:
Rh (5);
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7z6z (Na: 1) - Crystal Structure of Angiotensin-1 Converting Enzyme N-Domain in Complex with Fosinoprilat
Other atoms:
Cl (2);
Zn (2);
Ca (3);
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7z94 (Na: 1) - Crystal Structure of Variovorax Paradoxus Indole Monooxygenase (VPINDA1) in Complex with Indole
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7z9p (Na: 1) - The Novel Dna Binding Mechanism of Ridinilazole, A Precision Clostridiodes Difficile Antibiotic
Other atoms:
Zn (3);
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7za4 (Na: 2) - Gstf SH155 Mutant
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7zb0 (Na: 6) - Macrocyclase Ophp with 15MER
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7zb1 (Na: 16) - S580A with 18MER
Page generated: Thu Dec 28 11:31:43 2023
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