Sodium in PDB, part 264 (files: 10521-10560),
PDB 7sq4-7tin
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 10521-10560 (PDB 7sq4-7tin).
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7sq4 (Na: 1) - Designed Trefoil Knot Protein, Variant 2
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7sq5 (Na: 2) - Designed Trefoil Knot Protein, Variant 3
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7sq6 (Na: 2) - Cryo-Em Structure of Mouse Agonist Ml-SA1-Bound TRPML1 Channel at 2.32 Angstrom Resolution
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7sq7 (Na: 1) - Cryo-Em Structure of Mouse Pi(3,5)P2-Bound TRPML1 Channel at 2.41 Angstrom Resolution
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7sq8 (Na: 1) - Cryo-Em Structure of Mouse Apo TRPML1 Channel at 2.598 Angstrom Resolution
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7sq9 (Na: 2) - Cryo-Em Structure of Mouse Temsirolimus/Pi(3,5)P2-Bound TRPML1 Channel at 2.11 Angstrom Resolution
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7sqi (Na: 2) - Crosslinked Crystal Structure of Type II Fatty Acid Synthase Ketosynthase, Fabb, and C14-Crypto Acyl Carrier Protein, Acpp
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7stt (Na: 3) - Crystal Structure of Sulfatase From Pedobacter Yulinensis
Other atoms:
Ca (1);
Cl (1);
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7stu (Na: 3) - Crystal Structure of Sulfatase From Pedobacter Yulinensis
Other atoms:
Br (5);
Ca (1);
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7stv (Na: 2) - Crystal Structure of Sulfatase From Pedobacter Yulinensis
Other atoms:
Cl (2);
Ca (1);
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7sub (Na: 2) - 3-Oxoacyl-Acp Reductase Fabg
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7sxl (Na: 2) - Plasmodium Falciparum Apicoplast Dna Polymerase (Exo-Minus) Without Affinity Tag
Other atoms:
Cl (8);
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7sxm (Na: 1) - Structure of Xenon-Derivatized Methyl-Coenzyme M Reductase From Methanothermobacter Marburgensis
Other atoms:
Mg (2);
Ni (2);
Xe (8);
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7sxq (Na: 2) - Plasmodium Falciparum Apicoplast Dna Polymerase (Exo-Minus) Without Affinity Tag
Other atoms:
Cl (6);
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7syv (Na: 1) - Structure of the Wt Ires EIF5B-Containing Pre-48S Initiation Complex, Open Conformation. Structure 14(Wt)
Other atoms:
Zn (2);
Mg (1);
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7syw (Na: 1) - Structure of the Wt Ires EIF5B-Containing 48S Initiation Complex, Closed Conformation. Structure 15(Wt)
Other atoms:
Zn (1);
Mg (1);
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7sz8 (Na: 2) - Crystal Structure of Human CELSR1 EC4-7
Other atoms:
Mg (1);
Ca (16);
Cl (1);
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7sz9 (Na: 2) - Crosslinked Crystal Structure of Type II Fatty Acid Synthase Ketosynthase, Fabb, and C16:1-Crypto Acyl Carrier Protein, Acpp
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7szu (Na: 1) - Crystal Structure of Pepper Rna Aptamer in Complex with Hbc Ligand and Fab BL3-6
Other atoms:
Mg (2);
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7t1k (Na: 1) - Crystal Structure of A Superbinder Fes SH2 Domain (SFES1) in Complex with A High Affinity Phosphopeptide
Other atoms:
Cl (2);
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7t1l (Na: 1) - Crystal Structure of A Superbinder Fes SH2 Domain (Sfess) in Complex with A High Affinity Phosphopeptide
Other atoms:
Cl (1);
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7t3s (Na: 1) - Crystal Structure of Mouse Cadherin-23 EC8-9
Other atoms:
Ca (3);
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7t78 (Na: 2) - Crystal Structure of Glucokinase (Hexokinase 4) Complexed with Ligand Diethyl ({2-[3-(4-Methanesulfonylpheno Xy)-5-{[(2S)-1-Methoxypropan- 2-Yl]Oxy}Benzamido]-1,3-Thiaz Ol-4-Yl}Methyl)Phosphonate
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7t7h (Na: 2) - Crystal Structure of Vaccinia Virus Decapping Enzyme D9 in Complex with Inhibitor CP100356
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7t7z (Na: 1) - The Crystal Structure of Family 8 Carbohydrate-Binding Module From Dictyostelium Discoideum
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7t84 (Na: 1) - Structure of Angiotensin II Type I Receptor (AT1R) Nanobody Antagonist AT118I4H32 G26D T57I Variant
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7t88 (Na: 1) - Crystal Structure of the C-Terminal Domain of the Phosphate Acetyltransferase From Escherichia Coli
Other atoms:
K (1);
Cl (1);
I (2);
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7t8d (Na: 1) - Myocilin Olf Mutant V449I
Other atoms:
Ca (1);
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7t9g (Na: 4) - Structure of Vcindy-Na+
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7tb0 (Na: 3) - E. Faecium Muraa in Complex with Fosfomycin and Unag
Other atoms:
K (10);
Cl (4);
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7tbg (Na: 1) - ATTPC1 D454N with 1 Mm CA2+
Other atoms:
Ca (4);
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7tc5 (Na: 1) - All Phe-Azurin Variant - F15Y
Other atoms:
Cu (3);
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7tds (Na: 1) - Labrum-Interacting Protein From Saliva Lips-2 (34K-2) From Aedes Albopictus, Native Data
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7tgr (Na: 1) - Structure of Sars-Cov-2 Main Protease in Complex with GC376
Other atoms:
Cl (2);
K (1);
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7th5 (Na: 2) - Thermus Thermophilus Methylenetetrahydrofolate Reductase
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7thu (Na: 2) - Structure of Reduced Bovine Cytochrome C Oxidase at 1.93 Angstrom Resolution Obtained By Synchrotron X-Rays
Other atoms:
Zn (2);
Cu (6);
Fe (4);
Mg (2);
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7tie (Na: 2) - Structure of Oxidized Bovine Cytochrome C Oxidase at 1.90 Angstrom Resolution Obtained By Synchrotron X-Rays
Other atoms:
Mg (2);
Cu (6);
Zn (2);
Fe (4);
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7tih (Na: 2) - Structure of Oxidized Bovine Cytochrome C Oxidase with Reduced Metal Centers Induced By Synchrotron X-Ray Exposure
Other atoms:
Fe (4);
Cu (6);
Zn (2);
Mg (2);
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7tii (Na: 2) - Annealed Structure of Oxidized Bovine Cytochrome C Oxidase with Reduced Metal Centers Induced By Synchrotron X-Ray Exposure
Other atoms:
Mg (2);
Cu (6);
Zn (2);
Fe (4);
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7tin (Na: 4) - The Structure of S. Aureus Mend
Other atoms:
Cl (1);
Ca (4);
Page generated: Tue Feb 25 11:41:16 2025
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