Sodium in PDB 7sz8: Crystal Structure of Human CELSR1 EC4-7

The structure of Crystal Structure of Human CELSR1 EC4-7, PDB code: 7sz8 was solved by E.Tamilselvan, M.Sotomayor, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	46.38 / 2.34
Space group	P 1
Cell size a, b, c (Å), α, β, γ (°)	42.384, 76.943, 92.742, 89.83, 87.78, 76.24
R / Rfree (%)	21.3 / 27.9

The structure of Crystal Structure of Human CELSR1 EC4-7 also contains other interesting chemical elements:

Magnesium	(Mg)	1 atom
Calcium	(Ca)	16 atoms
Chlorine	(Cl)	1 atom

The binding sites of Sodium atom in the Crystal Structure of Human CELSR1 EC4-7 (pdb code 7sz8). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total 2 binding sites of Sodium where determined in the Crystal Structure of Human CELSR1 EC4-7, PDB code: 7sz8:
Jump to Sodium binding site number: 1; 2;

Sodium binding site 1 out of 2 in the Crystal Structure of Human CELSR1 EC4-7


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of Human CELSR1 EC4-7 within 5.0Å range: probe atom residue distance (Å) B Occ A:Na805 b:32.3 occ:1.00 OE1 A:GLU478 2.2 32.0 1.0 OD1 A:ASP561 2.3 29.7 1.0 O A:ALA562 2.3 31.6 1.0 OD1 A:ASP597 2.4 28.8 1.0 O A:HOH929 2.5 23.5 1.0 CD A:GLU478 3.2 31.8 1.0 OG1 A:THR564 3.2 37.0 1.0 CG A:ASP597 3.4 28.0 1.0 CG A:ASP561 3.4 31.6 1.0 OE2 A:GLU478 3.4 33.3 1.0 C A:ALA562 3.5 32.6 1.0 CB A:ASP597 3.8 27.7 1.0 N A:ALA562 3.8 31.6 1.0 CA A:ASP597 3.9 28.4 1.0 OD2 A:ASP561 3.9 32.6 1.0 N A:THR564 4.1 34.5 1.0 ND1 A:HIS565 4.2 33.2 1.0 CA A:ALA562 4.3 32.0 1.0 CB A:THR564 4.4 35.6 1.0 O A:HOH955 4.4 35.0 1.0 CE1 A:HIS565 4.4 33.9 1.0 OD2 A:ASP597 4.5 26.3 1.0 CG A:GLU478 4.5 31.1 1.0 N A:ASN563 4.6 34.0 1.0 CB A:ASP561 4.6 32.2 1.0 CA A:ASP561 4.6 31.8 1.0 C A:ASP561 4.6 32.5 1.0 CG2 A:THR564 4.7 37.2 1.0 CA A:THR564 4.8 34.8 1.0 C A:ASP597 4.8 29.4 1.0 N A:THR598 4.8 29.4 1.0 CA A:ASN563 4.8 34.0 1.0 N A:ASP597 4.9 28.6 1.0 CB A:ALA562 5.0 31.3 1.0 C A:ASN563 5.0 33.9 1.0

Sodium binding site 2 out of 2 in the Crystal Structure of Human CELSR1 EC4-7


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 2 of Crystal Structure of Human CELSR1 EC4-7 within 5.0Å range: probe atom residue distance (Å) B Occ B:Na805 b:38.5 occ:1.00 OE1 B:GLU478 2.3 28.9 1.0 OD1 B:ASP597 2.4 33.5 1.0 O B:ALA562 2.4 31.9 1.0 O B:HOH918 2.5 17.4 1.0 OD1 B:ASP561 2.6 37.0 1.0 CD B:GLU478 3.1 29.6 1.0 OE2 B:GLU478 3.3 28.8 1.0 CG B:ASP597 3.4 32.7 1.0 CB B:THR564 3.4 34.6 1.0 CG B:ASP561 3.4 37.7 1.0 C B:ALA562 3.6 34.5 1.0 OD2 B:ASP561 3.8 37.9 1.0 OG1 B:THR564 3.8 35.2 1.0 N B:ALA562 3.8 34.0 1.0 CB B:ASP597 3.8 32.0 1.0 N B:THR564 3.9 36.5 1.0 CA B:ASP597 4.0 32.1 1.0 CD2 B:HIS565 4.2 36.1 1.0 CG2 B:THR564 4.3 35.4 1.0 CA B:ALA562 4.3 34.4 1.0 CA B:THR564 4.3 36.2 1.0 OD2 B:ASP597 4.5 32.9 1.0 CG B:GLU478 4.6 29.4 1.0 NE2 B:HIS565 4.6 36.3 1.0 CB B:ASP561 4.7 36.9 1.0 N B:ASN563 4.7 36.2 1.0 C B:ASP561 4.8 35.3 1.0 CA B:ASP561 4.8 35.6 1.0 CB B:ALA562 4.8 33.7 1.0 CA B:ASN563 4.9 37.1 1.0 C B:ASN563 4.9 36.9 1.0 CB B:GLU478 5.0 30.1 1.0

E.Tamilselvan, M.Sotomayor. Crystal Structure of Human CELSR1 EC4-7 To Be Published.