Sodium in PDB 7tds: Labrum-Interacting Protein From Saliva Lips-2 (34K-2) From Aedes Albopictus, Native Data

The structure of Labrum-Interacting Protein From Saliva Lips-2 (34K-2) From Aedes Albopictus, Native Data, PDB code: 7tds was solved by P.Gabrieli, F.Forneris, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	46.43 / 2.20
Space group	P 43 21 2
Cell size a, b, c (Å), α, β, γ (°)	109.875, 109.875, 141.782, 90, 90, 90
R / Rfree (%)	18.6 / 20.8

The binding sites of Sodium atom in the Labrum-Interacting Protein From Saliva Lips-2 (34K-2) From Aedes Albopictus, Native Data (pdb code 7tds). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Labrum-Interacting Protein From Saliva Lips-2 (34K-2) From Aedes Albopictus, Native Data, PDB code: 7tds:

Sodium binding site 1 out of 1 in the Labrum-Interacting Protein From Saliva Lips-2 (34K-2) From Aedes Albopictus, Native Data


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Labrum-Interacting Protein From Saliva Lips-2 (34K-2) From Aedes Albopictus, Native Data within 5.0Å range: probe atom residue distance (Å) B Occ A:Na408 b:62.1 occ:1.00 OG1 A:THR35 2.7 59.1 1.0 CA A:GLU32 3.5 52.2 1.0 CB A:THR35 3.5 54.1 1.0 O A:GLU31 3.6 52.5 1.0 N A:GLU32 4.0 47.0 1.0 C A:GLU31 4.0 51.2 1.0 CB A:GLU32 4.1 53.7 1.0 O A:HOH548 4.2 64.8 1.0 CG2 A:THR35 4.2 50.5 1.0 C A:GLU32 4.4 51.8 1.0 O A:GLU32 4.5 49.2 1.0 CG A:GLU31 4.5 45.0 1.0 O A:HOH565 4.8 67.6 1.0 CA A:THR35 4.8 47.3 1.0 N A:THR35 4.9 49.4 1.0

I.Arnoldi, G.Mancini, M.Fumagalli, D.Gastaldi, L.D'andrea, C.Bandi, M.Di Venere, P.Iadarola, F.Forneris, P.Gabrieli. A Salivary Factor Binds A Cuticular Protein and Modulates Biting By Inducing Morphological Changes in the Mosquito Labrum. Curr.Biol. V. 32 3493 2022.
ISSN: ISSN 0960-9822
PubMed: 35835123
DOI: 10.1016/J.CUB.2022.06.049