Sodium in PDB 7tc5: All Phe-Azurin Variant - F15Y

The structure of All Phe-Azurin Variant - F15Y, PDB code: 7tc5 was solved by B.P.Fedoretz-Maxwell, L.J.Worrall, N.C.J.Strynadka, J.J.Warren, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	41.97 / 1.45
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	34.451, 53.83, 133.791, 90, 90, 90
R / Rfree (%)	18.3 / 21.4

The structure of All Phe-Azurin Variant - F15Y also contains other interesting chemical elements:

Copper

(Cu)

3 atoms

The binding sites of Sodium atom in the All Phe-Azurin Variant - F15Y (pdb code 7tc5). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the All Phe-Azurin Variant - F15Y, PDB code: 7tc5:

Sodium binding site 1 out of 1 in the All Phe-Azurin Variant - F15Y


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of All Phe-Azurin Variant - F15Y within 5.0Å range: probe atom residue distance (Å) B Occ A:Na203 b:20.9 occ:1.00 O A:ALA1 2.1 28.8 1.0 N A:ALA1 2.2 33.0 1.0 O A:HOH305 2.3 45.5 1.0 C A:ALA1 2.9 28.7 1.0 CA A:ALA1 3.0 30.9 1.0 CB A:ALA1 3.6 27.2 1.0 N A:GLU2 4.1 25.4 1.0 OG A:SER25 4.3 29.9 1.0 SG A:CYS3 4.9 29.1 1.0 CA A:GLU2 4.9 23.9 1.0

B.P.Fedoretz-Maxwell, C.H.Shin, G.A.Macneil, L.J.Worrall, R.Park, N.C.J.Strynadka, C.J.Walsby, J.J.Warren. The Impact of Second Coordination Sphere Methionine-Aromatic Interactions in Copper Proteins. Inorg.Chem. V. 61 5563 2022.
ISSN: ISSN 0020-1669
PubMed: 35347989
DOI: 10.1021/ACS.INORGCHEM.2C00030