Sodium in PDB, part 227 (files: 9041-9080),
PDB 6x15-6ybf
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 9041-9080 (PDB 6x15-6ybf).
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6x15 (Na: 9) - Inward-Facing State of the Glutamate Transporter Homologue Gltph in Complex with L-Aspartate and Sodium Ions
Other atoms:
Hg (3);
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6x1q (Na: 8) - 1.8 Angstrom Resolution Structure of B-Galactosidase with A 200 Kv Cryoarm Electron Microscope
Other atoms:
Mg (8);
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6x4i (Na: 1) - Crystal Structure of NSP15 Endoribonuclease From Sars Cov-2 in the Complex with 3'-Uridinemonophosphate
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6x5j (Na: 1) - Discovery of Hydroxy Pyrimidine Factor Ixa Inhibitors
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6x5l (Na: 1) - Discovery of Hydroxy Pyrimidine Factor Ixa Inhibitors
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6xbg (Na: 1) - Crystal Structure of the Sars-Cov-2 (Covid-19) Main Protease in Complex with Inhibitor UAW246
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6xbh (Na: 1) - Crystal Structure of the Sars-Cov-2 (Covid-19) Main Protease in Complex with Inhibitor UAW247
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6xbi (Na: 1) - Crystal Structure of the Sars-Cov-2 (Covid-19) Main Protease in Complex with Inhibitor UAW248
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6xep (Na: 1) - Crystal Structure of Thiamine-Monophosphate Kinase From Stenotrophomonas Maltophilia K279A
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6xfj (Na: 1) - Crystal Structure of the Type III Secretion Pilotin Invh
Other atoms:
Cd (19);
Cl (18);
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6xk2 (Na: 3) - Crystal Structure of Ribokinase From Cryptococcus Neoformans Var. Grubii Serotype A in Complex with Adp
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6xlw (Na: 2) - Crystal Structure of U2AF65 Bound to Adml Splice Site Sequence
Other atoms:
Br (1);
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6xpb (Na: 1) - Structure of Human GGT1 in Complex with 2-Amino-4-(((1- ((Carboxymethyl)Amino)-1-Oxobutan-2-Yl)Oxy)(Phenoxy)Phosphoryl) Butanoic Acid (Acpb) Molecule
Other atoms:
Cl (2);
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6xpc (Na: 1) - Structure of Human GGT1 in Complex with Full Gsh Molecule
Other atoms:
Cl (2);
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6xph (Na: 1) - Cutr Dimer with Domain Swap
Other atoms:
K (2);
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6xpm (Na: 1) - Crystal Structure of Sialate O-Acetylesterase From Bacteroides Vulgatus with Microfluidics Crystals at Room Temperature
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6xqp (Na: 1) - Structure of Human D462-E4 Tcr in Complex with Human MR1-5-Op-Ru
Other atoms:
Br (2);
Cl (4);
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6xro (Na: 2) - Crystal Structure of Glpg in Complex with Peptide Boronate Inhibitor, Ac-Krfrsmqysa-B(Oh)2
Other atoms:
Cl (2);
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6xso (Na: 1) - GH5-4 Broad Specificity Endoglucanase From An Uncultured Bacterium
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6xwb (Na: 2) - Crystal Structure of An R-Selective Transaminase From Thermomyces Stellatus.
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6xwd (Na: 2) - 14-3-3 Sigma Bound to Canonical Mono-Phosphorylated Aminopeptidase N (Apn, CD13) Binding Motif
Other atoms:
Mg (2);
Ca (1);
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6xwm (Na: 4) - Mechanism of Substrate Release in Neurotransmitter:Sodium Symporters: the Structure of Leut in An Inward-Facing Occluded Conformation
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6xxq (Na: 2) - Crystal Structure of Spectinomycin Adenyltransferase Aad(9) From Enterococcus Faecialis with Atp and Spectinomycin
Other atoms:
Mg (3);
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6xya (Na: 1) - Cap-Binding Domain of Sftsv L Protein
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6xyd (Na: 1) - Crystal Structure of Q4D6Q6, A Conserved Kinetoplastid-Specific Protein From Trypanosoma Cruzi
Other atoms:
Mg (2);
Cl (3);
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6xyt (Na: 10) - Crystal Structure of the O-State of the Light-Driven Sodium Pump KR2 in the Pentameric Form, pH 8.0
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6xyx (Na: 2) - Crystal Structure of the BCL6 Btb Domain in Complex with the NCOR1 Bbd Corepressor Peptide
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6xzz (Na: 7) - Crystal Structure of the BCL6 Btb Domain in Complex with the NCOR1 BBD2 Peptide
Other atoms:
F (3);
Cl (2);
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6y17 (Na: 1) - Crystal Structure of An NCOR1BBD2-BCL6BTB Chimera in Complex with NEBULINSH3-NCOR1BBD1
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6y3e (Na: 3) - Scaffold-Ligand Complex with Ligand Unmodelled
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6y45 (Na: 1) - Crystal Structure of the H33A Variant of Rsrr
Other atoms:
Fe (8);
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6y5m (Na: 4) - Crystal Structure of Mouse Autotaxin in Complex with Compound 1A
Other atoms:
F (1);
Zn (2);
Cl (3);
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6y5s (Na: 1) - Crystal Structure of Savinase at Cryogenic Conditions
Other atoms:
Ca (1);
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6y5t (Na: 1) - Crystal Structure of Savinase at Room Temperature
Other atoms:
Ca (1);
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6y76 (Na: 3) - AP01 - A Redesigned Transferrin Receptor Apical Domain
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6y8o (Na: 5) - Mycobacterium Smegmatis Gyrb 22KDA Atpase Sub-Domain in Complex with Novobiocin
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6y8y (Na: 5) - Structure of Baltic Herring (Clupea Harengus) Phosphoglucomutase 5 (PGM5) with Bound Glucose-1-Phosphate
Other atoms:
Ni (1);
Ca (1);
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6y8z (Na: 4) - Structure of Baltic Herring (Clupea Harengus) Phosphoglucomutase 5 (PGM5)
Other atoms:
Ni (1);
Ca (1);
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6y9j (Na: 1) - Crystal Structure of Subtype-Switched Epithelial Adhesin 1 to 9 A Domain (EPA1-CBL2EPA9) From Candida Glabrata in Complex with Beta- Lactose
Other atoms:
Ca (1);
Cl (2);
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6ybf (Na: 1) - Rt Structure of Hew Lysozyme Obtained at 1.13 A Resolution From Crystal Grown in A Kapton Microchip.
Other atoms:
Cl (1);
Page generated: Thu Dec 17 13:13:44 2020
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