Atomistry » Sodium » PDB 6x15-6ybf
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Sodium in PDB, part 227 (files: 9041-9080), PDB 6x15-6ybf

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 9041-9080 (PDB 6x15-6ybf).
  1. 6x15 (Na: 9) - Inward-Facing State of the Glutamate Transporter Homologue Gltph in Complex with L-Aspartate and Sodium Ions
    Other atoms: Hg (3);
  2. 6x1q (Na: 8) - 1.8 Angstrom Resolution Structure of B-Galactosidase with A 200 Kv Cryoarm Electron Microscope
    Other atoms: Mg (8);
  3. 6x4i (Na: 1) - Crystal Structure of NSP15 Endoribonuclease From Sars Cov-2 in the Complex with 3'-Uridinemonophosphate
  4. 6x5j (Na: 1) - Discovery of Hydroxy Pyrimidine Factor Ixa Inhibitors
  5. 6x5l (Na: 1) - Discovery of Hydroxy Pyrimidine Factor Ixa Inhibitors
  6. 6xbg (Na: 1) - Crystal Structure of the Sars-Cov-2 (Covid-19) Main Protease in Complex with Inhibitor UAW246
  7. 6xbh (Na: 1) - Crystal Structure of the Sars-Cov-2 (Covid-19) Main Protease in Complex with Inhibitor UAW247
  8. 6xbi (Na: 1) - Crystal Structure of the Sars-Cov-2 (Covid-19) Main Protease in Complex with Inhibitor UAW248
  9. 6xep (Na: 1) - Crystal Structure of Thiamine-Monophosphate Kinase From Stenotrophomonas Maltophilia K279A
  10. 6xfj (Na: 1) - Crystal Structure of the Type III Secretion Pilotin Invh
    Other atoms: Cd (19); Cl (18);
  11. 6xk2 (Na: 3) - Crystal Structure of Ribokinase From Cryptococcus Neoformans Var. Grubii Serotype A in Complex with Adp
  12. 6xlw (Na: 2) - Crystal Structure of U2AF65 Bound to Adml Splice Site Sequence
    Other atoms: Br (1);
  13. 6xpb (Na: 1) - Structure of Human GGT1 in Complex with 2-Amino-4-(((1- ((Carboxymethyl)Amino)-1-Oxobutan-2-Yl)Oxy)(Phenoxy)Phosphoryl) Butanoic Acid (Acpb) Molecule
    Other atoms: Cl (2);
  14. 6xpc (Na: 1) - Structure of Human GGT1 in Complex with Full Gsh Molecule
    Other atoms: Cl (2);
  15. 6xph (Na: 1) - Cutr Dimer with Domain Swap
    Other atoms: K (2);
  16. 6xpm (Na: 1) - Crystal Structure of Sialate O-Acetylesterase From Bacteroides Vulgatus with Microfluidics Crystals at Room Temperature
  17. 6xqp (Na: 1) - Structure of Human D462-E4 Tcr in Complex with Human MR1-5-Op-Ru
    Other atoms: Br (2); Cl (4);
  18. 6xro (Na: 2) - Crystal Structure of Glpg in Complex with Peptide Boronate Inhibitor, Ac-Krfrsmqysa-B(Oh)2
    Other atoms: Cl (2);
  19. 6xso (Na: 1) - GH5-4 Broad Specificity Endoglucanase From An Uncultured Bacterium
  20. 6xwb (Na: 2) - Crystal Structure of An R-Selective Transaminase From Thermomyces Stellatus.
  21. 6xwd (Na: 2) - 14-3-3 Sigma Bound to Canonical Mono-Phosphorylated Aminopeptidase N (Apn, CD13) Binding Motif
    Other atoms: Mg (2); Ca (1);
  22. 6xwm (Na: 4) - Mechanism of Substrate Release in Neurotransmitter:Sodium Symporters: the Structure of Leut in An Inward-Facing Occluded Conformation
  23. 6xxq (Na: 2) - Crystal Structure of Spectinomycin Adenyltransferase Aad(9) From Enterococcus Faecialis with Atp and Spectinomycin
    Other atoms: Mg (3);
  24. 6xya (Na: 1) - Cap-Binding Domain of Sftsv L Protein
  25. 6xyd (Na: 1) - Crystal Structure of Q4D6Q6, A Conserved Kinetoplastid-Specific Protein From Trypanosoma Cruzi
    Other atoms: Mg (2); Cl (3);
  26. 6xyt (Na: 10) - Crystal Structure of the O-State of the Light-Driven Sodium Pump KR2 in the Pentameric Form, pH 8.0
  27. 6xyx (Na: 2) - Crystal Structure of the BCL6 Btb Domain in Complex with the NCOR1 Bbd Corepressor Peptide
  28. 6xzz (Na: 7) - Crystal Structure of the BCL6 Btb Domain in Complex with the NCOR1 BBD2 Peptide
    Other atoms: F (3); Cl (2);
  29. 6y17 (Na: 1) - Crystal Structure of An NCOR1BBD2-BCL6BTB Chimera in Complex with NEBULINSH3-NCOR1BBD1
  30. 6y3e (Na: 3) - Scaffold-Ligand Complex with Ligand Unmodelled
  31. 6y45 (Na: 1) - Crystal Structure of the H33A Variant of Rsrr
    Other atoms: Fe (8);
  32. 6y5m (Na: 4) - Crystal Structure of Mouse Autotaxin in Complex with Compound 1A
    Other atoms: F (1); Zn (2); Cl (3);
  33. 6y5s (Na: 1) - Crystal Structure of Savinase at Cryogenic Conditions
    Other atoms: Ca (1);
  34. 6y5t (Na: 1) - Crystal Structure of Savinase at Room Temperature
    Other atoms: Ca (1);
  35. 6y76 (Na: 3) - AP01 - A Redesigned Transferrin Receptor Apical Domain
  36. 6y8o (Na: 5) - Mycobacterium Smegmatis Gyrb 22KDA Atpase Sub-Domain in Complex with Novobiocin
  37. 6y8y (Na: 5) - Structure of Baltic Herring (Clupea Harengus) Phosphoglucomutase 5 (PGM5) with Bound Glucose-1-Phosphate
    Other atoms: Ni (1); Ca (1);
  38. 6y8z (Na: 4) - Structure of Baltic Herring (Clupea Harengus) Phosphoglucomutase 5 (PGM5)
    Other atoms: Ni (1); Ca (1);
  39. 6y9j (Na: 1) - Crystal Structure of Subtype-Switched Epithelial Adhesin 1 to 9 A Domain (EPA1-CBL2EPA9) From Candida Glabrata in Complex with Beta- Lactose
    Other atoms: Ca (1); Cl (2);
  40. 6ybf (Na: 1) - Rt Structure of Hew Lysozyme Obtained at 1.13 A Resolution From Crystal Grown in A Kapton Microchip.
    Other atoms: Cl (1);
Page generated: Thu Dec 17 13:13:44 2020

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