Sodium in PDB, part 216 (files: 8601-8640),
PDB 6qtp-6r7k
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 8601-8640 (PDB 6qtp-6r7k).
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6qtp (Na: 1) - 2.37A Structure of Gepotidacin with S.Aureus Dna Gyrase and Uncleaved Dna
Other atoms:
Mn (3);
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6qu9 (Na: 1) - Fab Fragment of An Antibody That Inhibits Polymerisation of Alpha-1- Antitrypsin
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6qug (Na: 5) - Ghk Tagged Mbp-NUP98(1-29)
Other atoms:
Cu (12);
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6quh (Na: 11) - Ghk Tagged Gfp Variant Crystal Form II at 1.34A Wavelength
Other atoms:
Ca (1);
Cl (18);
Cu (6);
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6qvg (Na: 1) - Human SHMT2 in Complex with Lometrexol
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6qvy (Na: 3) - The Transcriptional Regulator Prfa-A94V Mutant From Listeria Monocytogenes
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6qvz (Na: 3) - The Transcriptional Regulator Prfa-L140H Mutant From Listeria Monocytogenes
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6qw1 (Na: 3) - The Transcriptional Regulator Prfa-L140F Mutant From Listeria Monocytogenes
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6qw2 (Na: 2) - The Transcriptional Regulator Prfa-A218G Mutant From Listeria Monocytogenes
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6qwu (Na: 1) - 4'-Phosphopantetheinyl Transferase Pptab From Mycobacterium Abscessus at pH 5.5 with MN2+ and Coa.
Other atoms:
Mn (2);
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6qwy (Na: 3) - Hewl Lysozyme, Crystallized From Nacl Solution
Other atoms:
Cl (4);
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6qxa (Na: 3) - Structure of Membrane Bound Pyrophosphatase From Thermotoga Maritima in Complex with Imidodiphosphate and N-[(2-Amino-6-Benzothiazolyl) Methyl]-1H-Indole-2-Carboxamide (Atc)
Other atoms:
Mg (20);
K (3);
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6qxj (Na: 1) - Structure of Mbp-Mcl-1 in Complex with Compound 6A
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6qxw (Na: 2) - Pink Beam Serial Crystallography: Lysozyme, 5 Us Exposure, 24344 Patterns Merged (3 Chips)
Other atoms:
Cl (2);
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6qxx (Na: 2) - Pink Beam Serial Crystallography: Lysozyme, 5 Us Exposure, 14793 Patterns Merged
Other atoms:
Cl (2);
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6qxy (Na: 2) - Pink Beam Serial Crystallography: Lysozyme, 5 Us Exposure, 8813 Patterns Merged (1 Chip)
Other atoms:
Cl (2);
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6qy0 (Na: 2) - Pink Beam Serial Crystallography: Lysozyme, 5 Us Exposure, 3000 Patterns Merged
Other atoms:
Cl (2);
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6qy1 (Na: 2) - Pink Beam Serial Crystallography: Lysozyme, 5 Us Exposure, 1500 Patterns Merged
Other atoms:
Cl (2);
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6qy2 (Na: 2) - Pink Beam Serial Crystallography: Lysozyme, 5 Us Exposure, 750 Patterns Merged
Other atoms:
Cl (2);
-
6qy4 (Na: 2) - Pink Beam Serial Crystallography: Lysozyme, 1 Us Exposure, 14793 Patterns Merged
Other atoms:
Cl (2);
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6qy5 (Na: 2) - Pink Beam Serial Crystallography: Lysozyme, 1 Us Exposure, 4448 Patterns Merged (1 Chip)
Other atoms:
Cl (2);
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6qyl (Na: 1) - Structure of Mbp-Mcl-1 in Complex with Compound 8A
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6qz7 (Na: 1) - Structure of Mbp-Mcl-1 in Complex with Compound 8B
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6qzh (Na: 1) - Structure of the Human Cc Chemokine Receptor 7 in Complex with the Intracellular Allosteric Antagonist CMP2105 and the Insertion Protein Sialidase Nana
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6qzw (Na: 1) - DPP8 Bound to A Dipeptide (Mp) From the N-Terminus of BRCA2
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6r1e (Na: 4) - Structure of Dodecin From Streptomyces Coelicolor
Other atoms:
Cl (4);
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6r1j (Na: 2) - Structure of the Soluble Ahlc Triple Head Mutant of the Tripartite Alpha-Pore Forming Toxin, Ahl, From Aeromonas Hydrophila.
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6r2o (Na: 2) - Hemoglobin Structure From Serial Crystallography with A 3D-Printed Nozzle.
Other atoms:
Fe (4);
Cl (1);
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6r5h (Na: 2) - Major Aspartyl Peptidase 1 From C. Neoformans
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6r61 (Na: 1) - Major Aspartyl Peptidase 1 From C. Neoformans in Complex with Inhibitor LP258
Other atoms:
Cl (1);
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6r62 (Na: 1) - Crystal Structure of A Class II Pyruvate Aldolase From Sphingomonas Wittichii RW1 in Complex with Hydroxypyruvate
Other atoms:
Mg (1);
K (2);
Br (2);
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6r6a (Na: 1) - Major Aspartyl Peptidase 1 From C. Neoformans
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6r6d (Na: 1) - [Ru(Tap)2(11,12-CN2-Dppz)]2+ Bound to D(Tcggcgccga)2
Other atoms:
Ru (1);
Ba (1);
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6r6k (Na: 6) - Structure of A Fpvc Mutant From Pseudomonas Aeruginosa
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6r6u (Na: 6) - Crystal Structure of Human Cis-Aconitate Decarboxylase
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6r78 (Na: 1) - Structure of Imp-13 Metallo-Beta-Lactamase in Apo Form (Loop Closed)
Other atoms:
Zn (4);
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6r79 (Na: 1) - Imp-13 Metallo-Beta-Lactamase in Apo Form (Loop Open)
Other atoms:
Zn (8);
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6r7a (Na: 1) - Ligand Complex of Rorg Lbd
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6r7j (Na: 1) - Ligand Complex of Rorg Lbd
Other atoms:
F (6);
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6r7k (Na: 1) - Ligand Complex of Rorg Lbd
Other atoms:
F (6);
Page generated: Tue Feb 25 11:39:21 2025
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