Sodium in PDB, part 22 (files: 841-880),
PDB 1x9j-1y4d
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 841-880 (PDB 1x9j-1y4d).
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1x9j (Na: 1) - Structure of Butyrate Kinase 2 Reveals Both Open- and Citrate-Induced Closed Conformations: Implications For Substrate-Induced Fit Conformational Changes
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1x9z (Na: 1) - Crystal Structure of the Mutl C-Terminal Domain
Other atoms:
Cl (2);
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1xar (Na: 4) - Crystal Structure of A Fragment of Dc-Signr (Containing the Carbohydrate Recognition Domain and Two Repeats of the Neck).
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1xc6 (Na: 1) - Native Structure of Beta-Galactosidase From Penicillium Sp. in Complex with Galactose
Other atoms:
I (52);
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1xcu (Na: 1) - Oligonucleotid/Drug Complex
Other atoms:
Co (3);
Ba (1);
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1xdf (Na: 1) - Crystal Structure of Pathogenesis-Related Protein Llpr- 10.2A From Yellow Lupine
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1xel (Na: 2) - Udp-Galactose 4-Epimerase From Escherichia Coli
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1xff (Na: 2) - Glutaminase Domain of Glucosamine 6-Phosphate Synthase Complexed with Glutamate
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1xfg (Na: 2) - Glutaminase Domain of Glucosamine 6-Phosphate Synthase Complexed with L-Glu Hydroxamate
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1xj4 (Na: 2) - Co-Bound Structure of Bjfixlh
Other atoms:
Fe (2);
Cl (1);
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1xj6 (Na: 2) - Structure of Bjfixlh in the Unliganded Ferrous Form
Other atoms:
Fe (2);
Cl (2);
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1xk8 (Na: 3) - Divalent Cation Tolerant Protein Cuta From Homo Sapiens O60888
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1xkn (Na: 1) - Crystal Structure of the Putative Peptidyl-Arginine Deiminase From Chlorobium Tepidum, Nesg Target CTR21
Other atoms:
Cl (1);
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1xlt (Na: 3) - Crystal Structure of Transhydrogenase [(Domain I)2:Domain III] Heterotrimer Complex
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1xmn (Na: 4) - Crystal Structure of Thrombin Bound to Heparin
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1xn1 (Na: 7) - Crystal Structure of Lumazine Synthase From Brucella Abortus (Orthorhombic Form at 3.05 Angstroms)
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1xnz (Na: 1) - Crystal Structure of Mn(II) Form of E. Coli. Methionine Aminopeptidase in Complex with 5-(2-Chlorophenyl)Furan-2- Carboxylic Acid
Other atoms:
Mn (2);
Cl (1);
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1xp7 (Na: 1) - Hiv-1 Subtype F Genomic Rna Dimerization Initiation Site
Other atoms:
Mg (4);
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1xpe (Na: 4) - Hiv-1 Subtype B Genomic Rna Dimerization Initiation Site
Other atoms:
Mg (2);
Cl (1);
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1xpf (Na: 1) - Hiv-1 Subtype A Genomic Rna Dimerization Initiation Site
Other atoms:
Mg (3);
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1xsl (Na: 6) - Crystal Structure of Human Dna Polymerase Lambda in Complex with A One Nucleotide Dna Gap
Other atoms:
Mg (3);
As (1);
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1xsn (Na: 2) - Crystal Structure of Human Dna Polymerase Lambda in Complex with A One Nucleotide Dna Gap and Ddttp
Other atoms:
Mg (1);
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1xsp (Na: 4) - Crystal Structure of Human Dna Polymerase Lambda in Complex with Nicked Dna and Pyrophosphate
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1xss (Na: 2) - Semi-Rational Engineering of A Green-Emitting Coral Fluorescent Protein Into An Efficient Highlighter.
Other atoms:
Mg (2);
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1xui (Na: 1) - Trypsin-Keto-Babim, Zn+2-Free, pH 8.2
Other atoms:
Ca (1);
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1xxf (Na: 2) - Crystal Structure of the Fxia Catalytic Domain in Complex with Ecotin Mutant (Ecotinp)
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1y0b (Na: 8) - Crystal Structure of Xanthine Phosphoribosyltransferase From Bacillus Subtilis.
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1y0p (Na: 1) - Flavocytochrome C3 with Mesaconate Bound
Other atoms:
Fe (4);
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1y1k (Na: 1) - Crystal Structure of the Complex of Subtilisin Bpn' with Chymotrypsin Inhibitor 2 T58A Mutant
Other atoms:
Ca (1);
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1y33 (Na: 1) - Crystal Structure of the Complex of Subtilisin Bpn' with Chymotrypsin Inhibitor 2 T58P Mutant
Other atoms:
Ca (1);
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1y34 (Na: 1) - Crystal Structure of the Complex of Subtilisin Bpn' with Chymotrypsin Inhibitor 2 E60A Mutant
Other atoms:
Ca (1);
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1y38 (Na: 1) - Crystal Structure of the Complex Formed Between Phospholipase A2 Dimer and Glycerophosphate at 2.4 A Resolution
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1y3b (Na: 1) - Crystal Structure of the Complex of Subtilisin Bpn' with Chymotrypsin Inhibitor 2 E60S Mutant
Other atoms:
Ca (1);
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1y3c (Na: 1) - Crystal Structure of the Complex of Subtilisin Bpn' with Chymotrypsin Inhibitor 2 R62A Mutant
Other atoms:
Ca (1);
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1y3d (Na: 1) - Crystal Structure of the Complex of Subtilisin Bpn' with Chymotrypsin Inhibitor 2 R67A Mutant
Other atoms:
Ca (1);
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1y3f (Na: 1) - Crystal Structure of the Complex of Subtilisin Bpn' with Chymotrypsin Inhibitor 2 F69A Mutant
Other atoms:
Ca (1);
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1y3o (Na: 3) - Hiv-1 Dis Rna Subtype F- Mn Soaked
Other atoms:
Br (2);
Mn (4);
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1y48 (Na: 1) - Crystal Structure of the Complex of Subtilisin Bpn' with Chymotrypsin Inhibitor 2 R65A Mutant
Other atoms:
Ca (1);
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1y4a (Na: 1) - Crystal Structure of the Complex of Subtilisin Bpn' with Chymotrypsin Inhibitor 2 M59R/E60S Mutant
Other atoms:
Ca (1);
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1y4d (Na: 1) - Crystal Structure of the Complex of Subtilisin Bpn' with Chymotrypsin Inhibitor 2 M59R/E60S Mutant
Other atoms:
Ca (1);
Page generated: Thu Dec 28 11:12:56 2023
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