Atomistry » Sodium » PDB 1x9j-1y4d
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Sodium in PDB, part 22 (files: 841-880), PDB 1x9j-1y4d

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 841-880 (PDB 1x9j-1y4d).
  1. 1x9j (Na: 1) - Structure of Butyrate Kinase 2 Reveals Both Open- and Citrate-Induced Closed Conformations: Implications For Substrate-Induced Fit Conformational Changes
  2. 1x9z (Na: 1) - Crystal Structure of the Mutl C-Terminal Domain
    Other atoms: Cl (2);
  3. 1xar (Na: 4) - Crystal Structure of A Fragment of Dc-Signr (Containing the Carbohydrate Recognition Domain and Two Repeats of the Neck).
  4. 1xc6 (Na: 1) - Native Structure of Beta-Galactosidase From Penicillium Sp. in Complex with Galactose
    Other atoms: I (52);
  5. 1xcu (Na: 1) - Oligonucleotid/Drug Complex
    Other atoms: Co (3); Ba (1);
  6. 1xdf (Na: 1) - Crystal Structure of Pathogenesis-Related Protein Llpr- 10.2A From Yellow Lupine
  7. 1xel (Na: 2) - Udp-Galactose 4-Epimerase From Escherichia Coli
  8. 1xff (Na: 2) - Glutaminase Domain of Glucosamine 6-Phosphate Synthase Complexed with Glutamate
  9. 1xfg (Na: 2) - Glutaminase Domain of Glucosamine 6-Phosphate Synthase Complexed with L-Glu Hydroxamate
  10. 1xj4 (Na: 2) - Co-Bound Structure of Bjfixlh
    Other atoms: Fe (2); Cl (1);
  11. 1xj6 (Na: 2) - Structure of Bjfixlh in the Unliganded Ferrous Form
    Other atoms: Fe (2); Cl (2);
  12. 1xk8 (Na: 3) - Divalent Cation Tolerant Protein Cuta From Homo Sapiens O60888
  13. 1xkn (Na: 1) - Crystal Structure of the Putative Peptidyl-Arginine Deiminase From Chlorobium Tepidum, Nesg Target CTR21
    Other atoms: Cl (1);
  14. 1xlt (Na: 3) - Crystal Structure of Transhydrogenase [(Domain I)2:Domain III] Heterotrimer Complex
  15. 1xmn (Na: 4) - Crystal Structure of Thrombin Bound to Heparin
  16. 1xn1 (Na: 7) - Crystal Structure of Lumazine Synthase From Brucella Abortus (Orthorhombic Form at 3.05 Angstroms)
  17. 1xnz (Na: 1) - Crystal Structure of Mn(II) Form of E. Coli. Methionine Aminopeptidase in Complex with 5-(2-Chlorophenyl)Furan-2- Carboxylic Acid
    Other atoms: Mn (2); Cl (1);
  18. 1xp7 (Na: 1) - Hiv-1 Subtype F Genomic Rna Dimerization Initiation Site
    Other atoms: Mg (4);
  19. 1xpe (Na: 4) - Hiv-1 Subtype B Genomic Rna Dimerization Initiation Site
    Other atoms: Mg (2); Cl (1);
  20. 1xpf (Na: 1) - Hiv-1 Subtype A Genomic Rna Dimerization Initiation Site
    Other atoms: Mg (3);
  21. 1xsl (Na: 6) - Crystal Structure of Human Dna Polymerase Lambda in Complex with A One Nucleotide Dna Gap
    Other atoms: Mg (3); As (1);
  22. 1xsn (Na: 2) - Crystal Structure of Human Dna Polymerase Lambda in Complex with A One Nucleotide Dna Gap and Ddttp
    Other atoms: Mg (1);
  23. 1xsp (Na: 4) - Crystal Structure of Human Dna Polymerase Lambda in Complex with Nicked Dna and Pyrophosphate
  24. 1xss (Na: 2) - Semi-Rational Engineering of A Green-Emitting Coral Fluorescent Protein Into An Efficient Highlighter.
    Other atoms: Mg (2);
  25. 1xui (Na: 1) - Trypsin-Keto-Babim, Zn+2-Free, pH 8.2
    Other atoms: Ca (1);
  26. 1xxf (Na: 2) - Crystal Structure of the Fxia Catalytic Domain in Complex with Ecotin Mutant (Ecotinp)
  27. 1y0b (Na: 8) - Crystal Structure of Xanthine Phosphoribosyltransferase From Bacillus Subtilis.
  28. 1y0p (Na: 1) - Flavocytochrome C3 with Mesaconate Bound
    Other atoms: Fe (4);
  29. 1y1k (Na: 1) - Crystal Structure of the Complex of Subtilisin Bpn' with Chymotrypsin Inhibitor 2 T58A Mutant
    Other atoms: Ca (1);
  30. 1y33 (Na: 1) - Crystal Structure of the Complex of Subtilisin Bpn' with Chymotrypsin Inhibitor 2 T58P Mutant
    Other atoms: Ca (1);
  31. 1y34 (Na: 1) - Crystal Structure of the Complex of Subtilisin Bpn' with Chymotrypsin Inhibitor 2 E60A Mutant
    Other atoms: Ca (1);
  32. 1y38 (Na: 1) - Crystal Structure of the Complex Formed Between Phospholipase A2 Dimer and Glycerophosphate at 2.4 A Resolution
  33. 1y3b (Na: 1) - Crystal Structure of the Complex of Subtilisin Bpn' with Chymotrypsin Inhibitor 2 E60S Mutant
    Other atoms: Ca (1);
  34. 1y3c (Na: 1) - Crystal Structure of the Complex of Subtilisin Bpn' with Chymotrypsin Inhibitor 2 R62A Mutant
    Other atoms: Ca (1);
  35. 1y3d (Na: 1) - Crystal Structure of the Complex of Subtilisin Bpn' with Chymotrypsin Inhibitor 2 R67A Mutant
    Other atoms: Ca (1);
  36. 1y3f (Na: 1) - Crystal Structure of the Complex of Subtilisin Bpn' with Chymotrypsin Inhibitor 2 F69A Mutant
    Other atoms: Ca (1);
  37. 1y3o (Na: 3) - Hiv-1 Dis Rna Subtype F- Mn Soaked
    Other atoms: Br (2); Mn (4);
  38. 1y48 (Na: 1) - Crystal Structure of the Complex of Subtilisin Bpn' with Chymotrypsin Inhibitor 2 R65A Mutant
    Other atoms: Ca (1);
  39. 1y4a (Na: 1) - Crystal Structure of the Complex of Subtilisin Bpn' with Chymotrypsin Inhibitor 2 M59R/E60S Mutant
    Other atoms: Ca (1);
  40. 1y4d (Na: 1) - Crystal Structure of the Complex of Subtilisin Bpn' with Chymotrypsin Inhibitor 2 M59R/E60S Mutant
    Other atoms: Ca (1);
Page generated: Fri Dec 24 09:39:04 2021

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