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Sodium in PDB 1xsl: Crystal Structure of Human Dna Polymerase Lambda in Complex with A One Nucleotide Dna Gap
Enzymatic activity of Crystal Structure of Human Dna Polymerase Lambda in Complex with A One Nucleotide Dna Gap
All present enzymatic activity of Crystal Structure of Human Dna Polymerase Lambda in Complex with A One Nucleotide Dna Gap:
2.7.7.7;
2.7.7.7;
Protein crystallography data
The structure of Crystal Structure of Human Dna Polymerase Lambda in Complex with A One Nucleotide Dna Gap, PDB code: 1xsl
was solved by
M.Garcia-Diaz,
K.Bebenek,
J.M.Krahn,
T.A.Kunkel,
L.C.Pedersen,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 28.47 / 2.30 |
| Space group | P 21 21 2 |
| Cell size a, b, c (Å), α, β, γ (°) | 191.504, 98.812, 104.519, 90.00, 90.00, 90.00 |
| R / Rfree (%) | 20.7 / 25.2 |
Other elements in 1xsl:
The structure of Crystal Structure of Human Dna Polymerase Lambda in Complex with A One Nucleotide Dna Gap also contains other interesting chemical elements:
| Magnesium | (Mg) | 3 atoms |
| Arsenic | (As) | 1 atom |
Sodium Binding Sites:
The binding sites of Sodium atom in the Crystal Structure of Human Dna Polymerase Lambda in Complex with A One Nucleotide Dna Gap
(pdb code 1xsl). This binding sites where shown within
5.0 Angstroms radius around Sodium atom.
In total 6 binding sites of Sodium where determined in the Crystal Structure of Human Dna Polymerase Lambda in Complex with A One Nucleotide Dna Gap, PDB code: 1xsl:
Jump to Sodium binding site number: 1; 2; 3; 4; 5; 6;
In total 6 binding sites of Sodium where determined in the Crystal Structure of Human Dna Polymerase Lambda in Complex with A One Nucleotide Dna Gap, PDB code: 1xsl:
Jump to Sodium binding site number: 1; 2; 3; 4; 5; 6;
Sodium binding site 1 out of 6 in 1xsl
Go back to
Sodium Binding Sites List in 1xsl
Sodium binding site 1 out
of 6 in the Crystal Structure of Human Dna Polymerase Lambda in Complex with A One Nucleotide Dna Gap
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 1 of Crystal Structure of Human Dna Polymerase Lambda in Complex with A One Nucleotide Dna Gap within 5.0Å range:
|
Sodium binding site 2 out of 6 in 1xsl
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Sodium Binding Sites List in 1xsl
Sodium binding site 2 out
of 6 in the Crystal Structure of Human Dna Polymerase Lambda in Complex with A One Nucleotide Dna Gap
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 2 of Crystal Structure of Human Dna Polymerase Lambda in Complex with A One Nucleotide Dna Gap within 5.0Å range:
|
Sodium binding site 3 out of 6 in 1xsl
Go back to
Sodium Binding Sites List in 1xsl
Sodium binding site 3 out
of 6 in the Crystal Structure of Human Dna Polymerase Lambda in Complex with A One Nucleotide Dna Gap
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 3 of Crystal Structure of Human Dna Polymerase Lambda in Complex with A One Nucleotide Dna Gap within 5.0Å range:
|
Sodium binding site 4 out of 6 in 1xsl
Go back to
Sodium Binding Sites List in 1xsl
Sodium binding site 4 out
of 6 in the Crystal Structure of Human Dna Polymerase Lambda in Complex with A One Nucleotide Dna Gap
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 4 of Crystal Structure of Human Dna Polymerase Lambda in Complex with A One Nucleotide Dna Gap within 5.0Å range:
|
Sodium binding site 5 out of 6 in 1xsl
Go back to
Sodium Binding Sites List in 1xsl
Sodium binding site 5 out
of 6 in the Crystal Structure of Human Dna Polymerase Lambda in Complex with A One Nucleotide Dna Gap
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 5 of Crystal Structure of Human Dna Polymerase Lambda in Complex with A One Nucleotide Dna Gap within 5.0Å range:
|
Sodium binding site 6 out of 6 in 1xsl
Go back to
Sodium Binding Sites List in 1xsl
Sodium binding site 6 out
of 6 in the Crystal Structure of Human Dna Polymerase Lambda in Complex with A One Nucleotide Dna Gap
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 6 of Crystal Structure of Human Dna Polymerase Lambda in Complex with A One Nucleotide Dna Gap within 5.0Å range:
|
Reference:
M.Garcia-Diaz,
K.Bebenek,
J.M.Krahn,
T.A.Kunkel,
L.C.Pedersen.
A Closed Conformation For the Pol Lambda Catalytic Cycle. Nat.Struct.Mol.Biol. V. 12 97 2005.
ISSN: ISSN 1545-9993
PubMed: 15608652
DOI: 10.1038/NSMB876
Page generated: Mon Oct 7 00:34:21 2024
ISSN: ISSN 1545-9993
PubMed: 15608652
DOI: 10.1038/NSMB876
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