Atomistry » Sodium » PDB 4myq-4nij
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Sodium in PDB, part 114 (files: 4521-4560), PDB 4myq-4nij

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 4521-4560 (PDB 4myq-4nij).
  1. 4myq (Na: 1) - Selective Inhibition of the Catalytic Domain of Human Phosphodiesterase 4B with A-33
    Other atoms: Mg (1); Zn (1); Cl (1);
  2. 4mzx (Na: 1) - Crystal Structure of Benzoylformate Decarboxylase Mutant T377L/A460Y
    Other atoms: Ca (1);
  3. 4n01 (Na: 2) - The Crystal Structure of A Periplasmic Binding Protein From Veillonella Parvula Dsm 2008
  4. 4n0j (Na: 1) - Crystal Structure of Dimethyllysine Hen Egg-White Lysozyme in Complex with SCLX4 at 1.9 A Resolution
    Other atoms: Mg (2); Cl (3);
  5. 4n3m (Na: 1) - Joint Neutron/X-Ray Structure of Urate Oxidase in Complex with 8- Azaxanthine
    Other atoms: Cl (1);
  6. 4n3p (Na: 18) - Crystal Structure of De Novo Designed Serine Hydrolase OSH18, Northeast Structural Genomics Consortium (Nesg) Target OR396
    Other atoms: Cl (1);
  7. 4n3v (Na: 2) - Crystal Structure of A Bile-Acid 7-Alpha Dehydratase (CLOHIR_00079) From Clostridium Hiranonis Dsm 13275 at 1.89 A Resolution with Product Added
    Other atoms: Zn (2);
  8. 4n49 (Na: 1) - Cap-Specific Mrna (Nucleoside-2'-O-)-Methyltransferase 1 Protein in Complex with M7GPPPG and Sam
  9. 4n6h (Na: 1) - 1.8 A Structure of the Human Delta Opioid 7TM Receptor (Psi Community Target)
  10. 4n7b (Na: 2) - Structure of the E-1-Hydroxy-2-Methyl-But-2-Enyl-4-Diphosphate Reductase From Plasmodium Falciparum
    Other atoms: Fe (3);
  11. 4n7s (Na: 1) - Crystal Structure of TSE3-TSI3 Complex with Zinc Ion
    Other atoms: Zn (7); Ca (2); Cl (2);
  12. 4n8z (Na: 1) - In Situ Lysozyme Crystallized on A Mitegen Micromesh with Benzamidine Ligand
    Other atoms: Cl (5);
  13. 4n9m (Na: 1) - Joint Neutron/X-Ray Structure of Urate Oxidase in Complex with 8- Hydroxyxanthine
    Other atoms: Cl (1);
  14. 4n9r (Na: 1) - X-Ray Structure of the Complex Between Hen Egg White Lysozyme and Pentacholrocarbonyliridate(III) (1 Day)
    Other atoms: Cl (4); Ir (1);
  15. 4n9s (Na: 1) - High Resolution X-Ray Structure of Urate Oxidase in Complex with 8- Hydroxyxanthine
    Other atoms: Cl (1);
  16. 4n9v (Na: 1) - High Resolution X-Ray Structure of Urate Oxidase in Complex with 8- Azaxanthine
    Other atoms: Zn (2); Cl (1);
  17. 4nao (Na: 1) - Crystal Structure of Eash
    Other atoms: Fe (1);
  18. 4naw (Na: 4) - Crystal Structure of Human ATG12~ATG5-ATG16N in Complex with A Fragment of ATG3
  19. 4nbs (Na: 2) - The Structure of AIF2GAMMA Subunit H20F From Archaeon Sulfolobus Solfataricus Complexed with Gdpcp
    Other atoms: Mg (1);
  20. 4ncn (Na: 2) - Crystal Structure of Eukaryotic Translation Initiation Factor EIF5B (517-858) From Chaetomium Thermophilum in Complex with Gtp
    Other atoms: Mg (2);
  21. 4ncz (Na: 3) - Spermidine N-Acetyltransferase From Vibrio Cholerae in Complex with 2- [N-Cyclohexylamino]Ethane Sulfonate.
    Other atoms: Ca (2);
  22. 4nd7 (Na: 1) - Crystal Structure of Apo 3-Nitro-Tyrosine Trna Synthetase (5B) in the Closed Form
  23. 4nda (Na: 1) - Crystal Structure of 3-Nitro-Tyrosine Trna Synthetase (5B) Bound to 3- Nitro-Tyrosine
  24. 4ndf (Na: 1) - Human Aprataxin (Aptx) Bound to Rna-Dna, Amp, and Zn - Product Complex
    Other atoms: K (1); Zn (2);
  25. 4ndi (Na: 1) - Human Aprataxin (Aptx) AOA1 Variant K197Q Bound to Rna-Dna, Amp, and Zn - Product Complex
    Other atoms: K (2); Zn (2);
  26. 4nds (Na: 3) - Crystal Structure of L. Decastes Alpha-Galactosyl-Binding Lectin
  27. 4nec (Na: 3) - Conversion of A Disulfide Bond Into A Thioacetal Group During Echinomycin Biosynthesis
  28. 4neh (Na: 1) - An Internal Ligand-Bound, Metastable State of A Leukocyte Integrin, AXB2
    Other atoms: Mg (2); Cl (1); Ca (5);
  29. 4ngt (Na: 1) - Crystal Structure of Glutamate Carboxypeptidase II in A Complex with Urea-Based Inhibitor
    Other atoms: Zn (2); Br (2); Ca (1); Cl (1);
  30. 4nhd (Na: 3) - Crystal Structure of Beta-Ketoacyl-Acp Synthase III (Fabh) From Vibrio Cholerae in Complex with Coenzyme A
    Other atoms: Ca (7);
  31. 4nhp (Na: 1) - X-Ray Structure of the Complex Between the Hen Egg White Lysozyme and Pentachlorocarbonyliridate (III) (4 Days)
    Other atoms: Cl (12); Ir (3);
  32. 4nhq (Na: 1) - X-Ray Structure of the Complex Between Hen Egg White Lysozyme and Pentachlorocarbonyliridate(III) (5 Days)
    Other atoms: Cl (14); Ir (3);
  33. 4nhs (Na: 1) - X-Ray Structure of the Complex Between Hen Egg White Lysozyme and Pentachlorocarbonyliridate(III) (9 Days)
    Other atoms: Cl (6); Ir (1);
  34. 4nht (Na: 1) - X-Ray Structure of the Complex Between Hen Egg White Lysozyme and Pentachlorocarbonyliridate(III) (6 Days)
    Other atoms: Cl (22); Ir (5);
  35. 4nhx (Na: 1) - Crystal Structure of Human OGFOD1, 2-Oxoglutarate and Iron-Dependent Oxygenase Domain Containing 1, in Complex with N-Oxalylglycine (Nog)
    Other atoms: Mn (1);
  36. 4ni3 (Na: 3) - Crystal Structure of GH29 Family Alpha-L-Fucosidase From Fusarium Graminearum in the Closed Form
  37. 4ni7 (Na: 2) - Crystal Structure of Human Interleukin 6 in Complex with A Modified Nucleotide Aptamer (Somamer SL1025)
  38. 4ni9 (Na: 2) - Crystal Structure of Human Interleukin 6 in Complex with A Modified Nucleotide Aptamer (Somamer SL1025), Form 2
  39. 4nif (Na: 2) - Heterodimeric Structure of ERK2 and RSK1
  40. 4nij (Na: 1) - X-Ray Structure of the Complex Between Hen Egg White Lysozyme and Pentachlorocarbonyliridate(III) (30 Days)
    Other atoms: Cl (5); Ir (1);
Page generated: Tue Dec 1 10:40:23 2020

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