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Sodium in PDB, part 88 (files: 3481-3520), PDB 3wc3-3wxo

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 3481-3520 (PDB 3wc3-3wxo).
  1. 3wc3 (Na: 1) - Crystal Structure of Endo-1,4-Beta-Glucanase From Eisenia Fetida
    Other atoms: Ca (1);
  2. 3wdq (Na: 2) - Crystal Structure of Beta-Mannanase From A Symbiotic Protist of the Termite Reticulitermes Speratus
    Other atoms: Mg (2);
  3. 3wdr (Na: 2) - Crystal Structure of Beta-Mannanase From A Symbiotic Protist of the Termite Reticulitermes Speratus Complexed with Gluco-Manno- Oligosaccharide
    Other atoms: Mg (2);
  4. 3we7 (Na: 2) - Crystal Structure of Diacetylchitobiose Deacetylase From Pyrococcus Horikoshii
    Other atoms: Zn (3);
  5. 3wfa (Na: 2) - Catalytic Role of the Calcium Ion in GH97 Inverting Glycoside Hydrolase
  6. 3wg7 (Na: 4) - A 1.9 Angstrom Radiation Damage Free X-Ray Structure of Large (420KDA) Protein By Femtosecond Crystallography
    Other atoms: Mg (2); Zn (2); Fe (4); Cu (6);
  7. 3wgu (Na: 8) - Crystal Structure of A Na+-Bound Na+,K+-Atpase Preceding the E1P State Without Oligomycin
    Other atoms: F (8); Mg (4); Al (2);
  8. 3wgv (Na: 8) - Crystal Structure of A Na+-Bound Na+,K+-Atpase Preceding the E1P State with Oligomycin
    Other atoms: F (8); Mg (4); Al (2);
  9. 3wh5 (Na: 1) - Crystal Structure of GH1 Beta-Glucosidase TD2F2
  10. 3wh6 (Na: 1) - Crystal Structure of GH1 Beta-Glucosidase TD2F2 Glucose Complex
  11. 3wh7 (Na: 1) - Crystal Structure of GH1 Beta-Glucosidase TD2F2 L-Fucose Complex
  12. 3wh8 (Na: 1) - Crystal Structure of GH1 Beta-Glucosidase TD2F2 Isofagomine Complex
  13. 3wi9 (Na: 2) - Crystal Structure of Copper Nitrite Reductase From Geobacillus Kaustophilus
    Other atoms: Cu (2); Zn (3);
  14. 3wkq (Na: 1) - Copper-Containing Nitrite Reductase From Geobacillus Thermodenitrificans in Complex with Formate
    Other atoms: Cu (6);
  15. 3wky (Na: 1) - Crystal Structure of Hemolymph Type Prophenoloxidase (Propob) From Crustacean
    Other atoms: Mg (1); Cu (4); Cl (5);
  16. 3wl2 (Na: 2) - Monoclinic Lysozyme at 0.96 A Resolution
  17. 3wmp (Na: 6) - Crystal Structure of Sll-2
    Other atoms: Cl (12);
  18. 3wmq (Na: 1) - Crystal Structure of the Complex Between Sll-2 and Galnac.
    Other atoms: Cl (4);
  19. 3wnj (Na: 1) - 1.20 A Resolution Crystal Structure of Dioxygen Bound Copper- Containing Nitrite Reductase From Geobacillus Thermodenitrificans
    Other atoms: Cu (8);
  20. 3wnk (Na: 2) - Crystal Structure of Bacillus Circulans T-3040 Cycloisomaltooligosaccharide Glucanotransferase
    Other atoms: Cd (10); Ca (2);
  21. 3wnl (Na: 1) - D308A Mutant of Bacillus Circulans T-3040 Cycloisomaltooligosaccharide Glucanotransferase Complexed with Isomaltohexaose
    Other atoms: Ca (1);
  22. 3wnm (Na: 1) - D308A Mutant of Bacillus Circulans T-3040 Cycloisomaltooligosaccharide Glucanotransferase Complexed with Isomaltoheptaose
    Other atoms: Ca (1);
  23. 3wnn (Na: 2) - D308A Mutant of Bacillus Circulans T-3040 Cycloisomaltooligosaccharide Glucanotransferase Complexed with Isomaltooctaose
    Other atoms: Ca (2);
  24. 3wno (Na: 2) - D308A Mutant of Bacillus Circulans T-3040 Cycloisomaltooligosaccharide Glucanotransferase Complexed with Cycloisomaltooctaose
    Other atoms: Ca (2);
  25. 3wnp (Na: 2) - D308A, F268V, D469Y, A513V, and Y515S Quintuple Mutant of Bacillus Circulans T-3040 Cycloisomaltooligosaccharide Glucanotransferase Complexed with Isomaltoundecaose
    Other atoms: Ca (2);
  26. 3wnu (Na: 2) - The Crystal Structure of Catalase-Peroxidase, Katg, From Synechococcus PCC7942
    Other atoms: Fe (1);
  27. 3wpc (Na: 1) - Crystal Structure of Horse TLR9 in Complex with Agonistic DNA1668_12MER
  28. 3wrn (Na: 2) - Minute Virus of Mice Non-Structural Protein-1N-Terminal Nuclease Domain Reveals A Unique ZN2+ Coordination in the Active Site Pocket and Shows A Novel Mode of Dna Recognition at the Origin of Replication
    Other atoms: Zn (1);
  29. 3wsu (Na: 4) - Crystal Structure of Beta-Mannanase From Streptomyces Thermolilacinus
  30. 3wtn (Na: 2) - Crystal Structure of Lymnaea Stagnalis Acetylcholine Binding Protein Complexed with Desnitro-Imidacloprid
    Other atoms: Cd (54); Cl (15);
  31. 3wul (Na: 1) - Crystal Structure of Hen Egg-White Lysozyme
    Other atoms: Cl (1);
  32. 3wum (Na: 1) - Crystal Structure of Hen Egg-White Lysozyme
    Other atoms: Cl (1);
  33. 3wun (Na: 1) - Crystal Structure of Hen Egg-White Lysozyme
    Other atoms: Cl (1);
  34. 3wup (Na: 1) - Crystal Structure of the Ubiquitin-Binding Zinc Finger (Ubz) Domain of the Human Dna Polymerase Eta
    Other atoms: Cl (1); Zn (1);
  35. 3wv1 (Na: 2) - Crystal Structure of the Catalytic Domain of Mmp-13 Complexed with 4- (2-((6-Fluoro-2-((3-Methoxybenzyl)Carbamoyl)-4-Oxo-3,4- Dihydroquinazolin-5-Yl)Oxy)Ethyl)Benzoic Acid
    Other atoms: F (2); Zn (4); Ca (4);
  36. 3wv2 (Na: 2) - Crystal Structure of the Catalytic Domain of Mmp-13 Complexed with N- (3-Methoxybenzyl)-4-Oxo-3,4-Dihydroquinazoline-2-Carboxamide
    Other atoms: Ca (4); Zn (4);
  37. 3wv3 (Na: 2) - Crystal Structure of the Catalytic Domain of Mmp-13 Complexed with N- (3-Methoxybenzyl)-4-Oxo-3,4-Dihydrothieno[2,3-D]Pyrimidine-2- Carboxamide
    Other atoms: Ca (4); Zn (4);
  38. 3wvg (Na: 8) - Time-Resolved Crystal Structure of Hindiii with 0SEC Soaking
  39. 3wwv (Na: 1) - C-Terminal Domain of Stomatin Operon Partner Protein 1510-C From Pyrococcus Horikoshii
  40. 3wxo (Na: 4) - Crystal Structure of Isoniazid Bound Katg Catalase Peroxidase From Synechococcus Elongatus PCC7942
    Other atoms: Fe (1);
Page generated: Tue Dec 1 10:37:33 2020

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