Sodium in PDB, part 54 (files: 2121-2160),
PDB 3b2n-3biu
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 2121-2160 (PDB 3b2n-3biu).
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3b2n (Na: 1) - Crystal Structure of Dna-Binding Response Regulator, Luxr Family, From Staphylococcus Aureus
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3b2p (Na: 2) - Crystal Structure of E. Coli Aminopeptidase N in Complex with Arginine
Other atoms:
Zn (1);
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3b2s (Na: 1) - Crystal Sructure of F. Graminearum TRI101 Complexed with Coenzyme A and Deoxynivalenol
Other atoms:
Mg (1);
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3b2x (Na: 2) - Crystal Structure of E. Coli Aminopeptidase N in Complex with Lysine
Other atoms:
Zn (1);
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3b34 (Na: 2) - Crystal Structure of E. Coli Aminopeptidase N in Complex with Phenylalanine
Other atoms:
Zn (1);
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3b35 (Na: 7) - Crystal Structure of the M180A Mutant of the Aminopeptidase From Vibrio Proteolyticus
Other atoms:
Zn (2);
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3b37 (Na: 2) - Crystal Structure of E. Coli Aminopeptidase N in Complex with Tyrosine
Other atoms:
Zn (1);
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3b3b (Na: 2) - Crystal Structure of E. Coli Aminopeptidase N in Complex with Tryptophan
Other atoms:
Zn (1);
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3b3c (Na: 6) - Crystal Structure of the M180A Mutant of the Aminopeptidase From Vibrio Proteolyticus in Complex with Leucine Phosphonic Acid
Other atoms:
K (1);
Zn (2);
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3b3s (Na: 8) - Crystal Structure of the M180A Mutant of the Aminopeptidase From Vibrio Proteolyticus in Complex with Leucine
Other atoms:
Zn (2);
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3b3t (Na: 3) - Crystal Structure of the D118N Mutant of the Aminopeptidase From Vibrio Proteolyticus
Other atoms:
Zn (2);
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3b3v (Na: 3) - Crystal Structure of the S228A Mutant of the Aminopeptidase From Vibrio Proteolyticus
Other atoms:
Zn (2);
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3b3w (Na: 2) - Crystal Structure of the S228A Mutant of the Aminopeptidase From Vibrio Proteolyticus in Complex with Leucine
Other atoms:
Zn (2);
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3b5g (Na: 1) - Crystal Structure of the Unstable and Highly Fibrillogenic PRO7SER Mutant of the Recombinant Variable Domain 6AJL2
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3b6e (Na: 1) - Crystal Structure of Human Dech-Box Rna Helicase MDA5 (Melanoma Differentiation-Associated Protein 5), Dech- Domain
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3b6p (Na: 4) - Structure of TREX1 in Complex with A Nucleotide and Inhibitor Ions (Sodium and Zinc)
Other atoms:
Zn (4);
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3b72 (Na: 1) - Crystal Structure of Lysozyme Folded in Sds and 2-Methyl-2, 4-Pentanediol
Other atoms:
Cl (2);
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3b76 (Na: 1) - Crystal Structure of the Third Pdz Domain of Human Ligand- of-Numb Protein-X (LNX1) in Complex with the C-Terminal Peptide From the Coxsackievirus and Adenovirus Receptor
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3b7i (Na: 2) - Crystal Structure of the S228A Mutant of the Aminopeptidase From Vibrio Proteolyticus in Complex with Leucine Phosphonic Acid
Other atoms:
K (1);
Zn (2);
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3b7v (Na: 1) - Hiv-1 Protease Complexed with Gem-Diol-Amine Tetrahedral Intermediate Nlltqi
Other atoms:
Cl (3);
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3b80 (Na: 1) - Hiv-1 Protease Mutant I54V Complexed with Gem-Diol-Amine Intermediate Nlltqi
Other atoms:
Cl (3);
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3b81 (Na: 1) - Crystal Structure of Predicted Dna-Binding Transcriptional Regulator of Tetr/Acrr Family (NP_350189.1) From Clostridium Acetobutylicum at 2.10 A Resolution
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3b8x (Na: 8) - Crystal Structure of Gdp-4-Keto-6-Deoxymannose-3- Dehydratase (Cold) H188N Mutant with Bound Gdp-Perosamine
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3b9b (Na: 1) - Structure of the E2 Beryllium Fluoride Complex of the Serca CA2+-Atpase
Other atoms:
F (3);
Mg (2);
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3b9g (Na: 1) - Crystal Structure of Loop Deletion Mutant of Trypanosoma Vivax Nucleoside Hydrolase (3GTVNH) in Complex with Immh
Other atoms:
Ca (2);
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3baw (Na: 3) - Human Pancreatic Alpha-Amylase Complexed with Azide
Other atoms:
Cl (1);
Ca (1);
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3bax (Na: 3) - N298S Variant of Human Pancreatic Alpha-Amylase in Complex with Azide
Other atoms:
Cl (1);
Ca (1);
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3bc9 (Na: 1) - Alpha-Amylase B in Complex with Acarbose
Other atoms:
Ca (4);
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3bcd (Na: 1) - Alpha-Amylase B in Complex with Maltotetraose and Alpha- Cyclodextrin
Other atoms:
Ca (7);
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3bcf (Na: 1) - Alpha-Amylase B From Halothermothrix Orenii
Other atoms:
Ca (4);
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3be8 (Na: 1) - Crystal Structure of the Synaptic Protein Neuroligin 4
Other atoms:
Cl (6);
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3beu (Na: 2) - Na+-Dependent Allostery Mediates Coagulation Factor Protease Active Site Selectivity
Other atoms:
Ca (2);
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3bft (Na: 2) - Structure of the Ligand-Binding Core of GLUR2 in Complex with the Agonist (S)-Tdpa at 2.25 A Resolution
Other atoms:
Zn (5);
As (1);
Cl (1);
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3bga (Na: 4) - Crystal Structure of Beta-Galactosidase From Bacteroides Thetaiotaomicron Vpi-5482
Other atoms:
Mg (2);
Cl (2);
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3bh4 (Na: 2) - High Resolution Crystal Structure of Bacillus Amyloliquefaciens Alpha-Amylase
Other atoms:
Ca (8);
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3bh9 (Na: 1) - Crystal Structure of Rty Phosphopeptide Bound to Human Class I Mhc Hla-A2
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3bhd (Na: 1) - Crystal Structure of Human Thiamine Triphosphatase (Thtpa)
Other atoms:
Cl (2);
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3bia (Na: 1) - Tim-4 in Complex with Sodium Potassium Tartrate
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3bib (Na: 1) - Tim-4 in Complex with Phosphatidylserine
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3biu (Na: 2) - Human Thrombin-in Complex with Ub-THR10
Page generated: Sun Dec 15 11:34:51 2024
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