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Sodium in PDB, part 267 (files: 10641-10680), PDB 7zyq-8acy

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 10641-10680 (PDB 7zyq-8acy).
  1. 7zyq (Na: 1) - Crystal Structure of Egfr-T790M/V948R in Complex with Reversible Aminopyrimidine 13
    Other atoms: Cl (2);
  2. 7zzo (Na: 3) - HDAC2 in Complex with An Inhibitor
    Other atoms: Ca (3); F (3); Zn (3);
  3. 7zzp (Na: 3) - Structure of HDAC2 Complexed with An Inhibitory Ligand
    Other atoms: Ca (3); Zn (3);
  4. 7zzr (Na: 3) - HDAC2 in Complex with Inhibitory Ligand
    Other atoms: Ca (3); Zn (3);
  5. 7zzs (Na: 3) - HDAC2 Complexed with An Inhibitory Ligand
    Other atoms: Zn (3); Cl (3); Ca (3);
  6. 7zzt (Na: 3) - Ligand Binding to HDAC2
    Other atoms: Ca (3); Zn (3);
  7. 7zzu (Na: 3) - Inhibitory Ligand Binding to HDAC2
    Other atoms: Zn (3); Ca (3);
  8. 7zzw (Na: 3) - Ligand Binding to HDAC2
    Other atoms: Zn (3); Cl (3); Ca (3);
  9. 8a0b (Na: 3) - Inhibitor Binding to HDAC2
    Other atoms: Ca (3); Zn (3);
  10. 8a1f (Na: 2) - Human Ptprk N-Terminal Domains Mam-Ig-FN1
  11. 8a1h (Na: 6) - Bacterial 6-4 Photolyase From Vibrio Cholerase
    Other atoms: Cl (1); Fe (4);
  12. 8a1k (Na: 1) - Crystal Structure of the Transpeptidase LDTMT2 From Mycobacterium Tuberculosis in Complex with Ebsulfur Analogue 15
    Other atoms: Cl (4);
  13. 8a1l (Na: 2) - Crystal Structure of the Transpeptidase LDTMT2 From Mycobacterium Tuberculosis in Complex with Alpha-Chloro Ketone 2
    Other atoms: Cl (2);
  14. 8a1m (Na: 3) - Crystal Structure of the Transpeptidase LDTMT2 From Mycobacterium Tuberculosis in Complex with Maleimide Analogue 4
    Other atoms: Cl (4); F (2);
  15. 8a1n (Na: 2) - Crystal Structure of the Transpeptidase LDTMT2 From Mycobacterium Tuberculosis in Complex with Fumaryl Amide Analogue 13
    Other atoms: Cl (1);
  16. 8a1o (Na: 1) - Crystal Structure of the Transpeptidase LDTMT2 From Mycobacterium Tuberculosis in Complex with Acrylamide Analogue 8
    Other atoms: Cl (4);
  17. 8a1t (Na: 1) - Sodium Pumping Nadh-Quinone Oxidoreductase
    Other atoms: K (1); Fe (4);
  18. 8a1u (Na: 2) - Sodium Pumping Nadh-Quinone Oxidoreductase with Substrates Nadh and Q2
    Other atoms: Fe (4);
  19. 8a1v (Na: 2) - Sodium Pumping Nadh-Quinone Oxidoreductase with Substrate Q2
    Other atoms: Fe (4);
  20. 8a1w (Na: 2) - Sodium Pumping Nadh-Quinone Oxidoreductase with Substrate Q1
    Other atoms: Fe (4);
  21. 8a29 (Na: 5) - Apo 1-Deoxy-D-Xylulose 5-Phosphate Synthase From Pseudomonas Aeruginosa
    Other atoms: Mg (13); Ca (12); Cl (2);
  22. 8a2o (Na: 1) - Room-Temperature Structure of the Stabilised A2A-Theophylline Complex Determined By Synchrotron Serial Crystallography
  23. 8a2p (Na: 1) - Room-Temperature Structure of the Stabilised A2A-LUAA47070 Complex Determined By Synchrotron Serial Crystallography
    Other atoms: F (2);
  24. 8a35 (Na: 4) - Nak C-Di Mutant with Rb+ and Na+
    Other atoms: Rb (4);
  25. 8a3g (Na: 1) - X-Ray Crystal Structure of A De Novo Designed Antiparallel Coiled-Coil Homotetramer with 4 Heptad Repeats, Apcc-Tet*
  26. 8a45 (Na: 4) - Structural Analysis of 1-Deoxy-D-Xylulose 5-Phosphate Synthase From Pseudomonas Aeruginosa with 2-Acetyl Thiamine Diphosphate
    Other atoms: Mg (6); Ca (12);
  27. 8a4d (Na: 5) - 1-Deoxy-D-Xylulose 5-Phosphate Synthase From Pseudomonas Aeruginosa with Thiamine Analog Inhibitor
    Other atoms: Ca (2); Mg (11);
  28. 8a4u (Na: 3) - Crystal Structure of Human Cathepsin L with CAA0225
  29. 8a4w (Na: 1) - Crystal Structure of Human Cathepsin L with Covalently Bound Cathepsin L Inhibitor IV
  30. 8a5b (Na: 4) - Crystal Structure of Human Cathepsin L in Complex with Covalently Bound Mg-101
  31. 8a66 (Na: 2) - Crystal Structure of MST2 in Complex with Xmu-Mp-1
  32. 8a67 (Na: 2) - Branched LYS48- and LYS63-Linked Tri-Ubiquitin (K48-K63-UB3) in Complex with Matured Synthetic Nanobody NBSL3.3Q (3RD Generation)
    Other atoms: Cl (1); Zn (2);
  33. 8a8o (Na: 3) - Paps Reductase From Methanothermococcus Thermolithotrophicus Refined to 1.45 A
    Other atoms: Ca (2); Fe (16);
  34. 8a9d (Na: 1) - Multicrystal Room Temperature Structure of Lysozyme Collected Using A Double Multilayer Monochromator.
  35. 8a9o (Na: 2) - Structure of the Polyamine Acetyltransferase Dpa
    Other atoms: Mg (2); Br (18);
  36. 8a9s (Na: 2) - Crystal Structure of CA2+-Discharged Obelin in Complex with Coelenteramine-V
  37. 8ac7 (Na: 9) - Structure of Pseudomonas Aeruginosa Aminopeptidase, Paap
    Other atoms: Zn (8);
  38. 8ack (Na: 9) - Structure of Pseudomonas Aeruginosa Aminopeptidase, Paap
    Other atoms: As (2); Zn (10);
  39. 8acr (Na: 1) - Structure of Pseudomonas Aeruginosa Aminopeptidase, Paap
    Other atoms: Zn (3);
  40. 8acy (Na: 1) - X-Ray Structure of Na+-Nqr From Vibrio Cholerae at 3.5 A Resolution
    Other atoms: Fe (4);
Page generated: Wed Nov 13 13:07:26 2024

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