Sodium in PDB 7wbo: Crystal Structure of Sarcoplasmic Calcium-Binding Protein From Scylla Paramamosain

The structure of Crystal Structure of Sarcoplasmic Calcium-Binding Protein From Scylla Paramamosain, PDB code: 7wbo was solved by Y.Chen, T.Jin, G.Liu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	40.52 / 1.60
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	81.121, 46.893, 64.474, 90, 125.35, 90
R / Rfree (%)	14.9 / 18.6

The structure of Crystal Structure of Sarcoplasmic Calcium-Binding Protein From Scylla Paramamosain also contains other interesting chemical elements:

Calcium

(Ca)

4 atoms

The binding sites of Sodium atom in the Crystal Structure of Sarcoplasmic Calcium-Binding Protein From Scylla Paramamosain (pdb code 7wbo). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of Sarcoplasmic Calcium-Binding Protein From Scylla Paramamosain, PDB code: 7wbo:

Sodium binding site 1 out of 1 in the Crystal Structure of Sarcoplasmic Calcium-Binding Protein From Scylla Paramamosain


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of Sarcoplasmic Calcium-Binding Protein From Scylla Paramamosain within 5.0Å range: probe atom residue distance (Å) B Occ A:Na212 b:14.2 occ:1.00 O A:HOH491 3.1 27.9 1.0 O A:HOH472 3.2 17.9 1.0 O A:HOH549 3.3 23.2 1.0 N A:CYS101 3.5 14.4 1.0 CD A:PRO100 3.6 15.9 1.0 N A:PRO100 3.8 14.7 1.0 SG A:CYS101 3.8 16.8 1.0 CD A:GLU64 3.8 15.4 1.0 CB A:PRO99 3.8 11.0 1.0 CB A:GLU64 3.8 10.1 1.0 CD1 A:LEU68 3.9 11.7 1.0 CG A:GLU64 3.9 13.0 1.0 CB A:PRO100 3.9 16.0 1.0 OE1 A:GLU64 4.0 17.5 1.0 CB A:CYS101 4.0 17.4 1.0 CG A:PRO100 4.0 16.4 1.0 CA A:PRO100 4.2 14.3 1.0 OE2 A:GLU64 4.3 24.2 1.0 C A:PRO99 4.3 12.1 1.0 C A:PRO100 4.3 14.1 1.0 CA A:CYS101 4.4 15.9 1.0 CA A:PRO99 4.5 11.2 1.0 O A:HOH550 4.6 23.8 1.0 CA A:GLU64 4.8 9.7 1.0 CG A:LEU68 5.0 9.8 1.0

Y.Chen, T.Jin. Crystal Structure of Sarcoplasmic Calcium-Binding Protein From Scylla Paramamosain To Be Published.