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Sodium in PDB 7vwp: Structure of the Flavin-Dependent Monooxygenase FLSO1 From the Biosynthesis of Fluostatinsin

Protein crystallography data

The structure of Structure of the Flavin-Dependent Monooxygenase FLSO1 From the Biosynthesis of Fluostatinsin, PDB code: 7vwp was solved by Y.Zhang, C.Yang, L.Zhang, C.Zhang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 13.18 / 2.30
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 76.54, 84.636, 102.799, 91.31, 107.86, 115.39
R / Rfree (%) 21.2 / 27.1

Sodium Binding Sites:

The binding sites of Sodium atom in the Structure of the Flavin-Dependent Monooxygenase FLSO1 From the Biosynthesis of Fluostatinsin (pdb code 7vwp). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Structure of the Flavin-Dependent Monooxygenase FLSO1 From the Biosynthesis of Fluostatinsin, PDB code: 7vwp:

Sodium binding site 1 out of 1 in 7vwp

Go back to Sodium Binding Sites List in 7vwp
Sodium binding site 1 out of 1 in the Structure of the Flavin-Dependent Monooxygenase FLSO1 From the Biosynthesis of Fluostatinsin


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Structure of the Flavin-Dependent Monooxygenase FLSO1 From the Biosynthesis of Fluostatinsin within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Na508

b:30.4
occ:1.00
OD2 B:ASP462 2.4 14.7 1.0
O B:HOH612 2.7 21.7 1.0
N B:GLY481 3.0 23.4 1.0
OD2 B:ASP428 3.1 29.0 1.0
CG B:ASP462 3.2 15.7 1.0
CB B:ASP462 3.3 15.6 1.0
CA B:GLY481 3.4 28.8 1.0
N B:GLY479 3.5 21.7 1.0
N B:ALA480 3.7 22.6 1.0
CB B:ASP428 3.7 28.4 1.0
CA B:GLY479 3.8 22.6 1.0
CG B:ASP428 3.8 29.9 1.0
C B:GLY479 3.9 23.7 1.0
O B:HOH775 4.1 23.3 1.0
C B:ALA480 4.2 22.9 1.0
O B:PRO477 4.2 14.5 1.0
O B:GLY481 4.3 28.4 1.0
C B:GLY481 4.4 31.0 1.0
OD1 B:ASP462 4.4 16.0 1.0
CA B:ALA480 4.5 22.7 1.0
C B:ALA478 4.7 19.8 1.0
O B:HOH821 4.7 28.2 1.0
O B:GLY479 4.7 22.7 1.0
O B:HOH606 4.7 20.6 1.0
CB B:ALA476 4.8 17.7 1.0
CA B:ASP462 4.8 16.5 1.0

Reference:

C.Yang, L.Zhang, W.Zhang, C.Huang, Y.Zhu, X.Jiang, W.Liu, M.Zhao, B.C.De, C.Zhang. Biochemical and Structural Insights of Multifunctional Flavin-Dependent Monooxygenase FLSO1-Catalyzed Unexpected Xanthone Formation Nat Commun V. 13 5386 2022.
ISSN: ESSN 2041-1723
DOI: 10.1038/S41467-022-33131-0
Page generated: Wed Oct 9 09:23:45 2024

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