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Sodium in PDB, part 211 (files: 8401-8440), PDB 6nyp-6ooi

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 8401-8440 (PDB 6nyp-6ooi).
  1. 6nyp (Na: 2) - Crystal Structure of UL144/Btla Complex
  2. 6nyq (Na: 4) - Crystal Structure of Glycosylated Lysosomal Membrane Protein (Glmp) Luminal Domain Bound to A Fab Fragment
  3. 6nz8 (Na: 1) - Structure of Carbamylated Apo Oxa-231 Carbapenemase
    Other atoms: Cl (2);
  4. 6nzy (Na: 8) - Structural Determination of the Carboxy-Terminal Portion of Atp- Citrate Lyase
  5. 6o08 (Na: 1) - Gluconobacter Ene-Reductase (Gluer)
    Other atoms: Cl (2);
  6. 6o3a (Na: 1) - Crystal Structure of Frizzled 7 Crd in Complex with F7.B Fab
  7. 6o3c (Na: 1) - Crystal Structure of Active Smoothened Bound to SAG21K, Cholesterol, and NBSMO8
    Other atoms: F (2); Cl (1);
  8. 6o48 (Na: 1) - Wild-Type Hiv-1 Protease in Complex with A Substrate Analog Ca-P2
    Other atoms: Cl (2);
  9. 6o4y (Na: 4) - Structure of Hla-A2:01 with Peptide MM91
  10. 6o4z (Na: 6) - Structure of Hla-A2:01 with Peptide MM92
  11. 6o51 (Na: 5) - Structure of Hla-A2:01 with Peptide MM90
  12. 6o53 (Na: 2) - Structure of Hla-A2:01 with Peptide MM96
  13. 6o5e (Na: 4) - Crystal Structure of the Vitronectin Hemopexin-Like Domain
    Other atoms: Cl (2);
  14. 6o5x (Na: 1) - Crystal Structure of Multi-Drug Resistant Hiv-1 Protease Pr-S17 with Substrate Analog Ca-P2
    Other atoms: Cl (12);
  15. 6o6a (Na: 4) - Structure of the TRPM8 Cold Receptor By Single Particle Electron Cryo- Microscopy, Ligand-Free State
  16. 6o6j (Na: 2) - Crystal Structure of the Ljcastor Gating Ring in the CA2+ and Na+ Condition
    Other atoms: Mg (1); Ca (3);
  17. 6o6r (Na: 8) - Structure of the TRPM8 Cold Receptor By Single Particle Electron Cryo- Microscopy, Amtb-Bound State
  18. 6o72 (Na: 8) - Structure of the TRPM8 Cold Receptor By Single Particle Electron Cryo- Microscopy, Tc-I 2014-Bound State
    Other atoms: F (24);
  19. 6o7c (Na: 1) - Crystal Structure of the Ljcastor Gating Ring in the CA2+ and K+ State
    Other atoms: Mg (1); K (1); Ca (3);
  20. 6o7s (Na: 2) - Nitrogenase Mofep Mutant S188A From Azotobacter Vinelandii in the Indigo Carmine Oxidized State
    Other atoms: Mo (2); Fe (28);
  21. 6o8g (Na: 1) - Crystal Structure of Uvrb Bound to Fully Duplex Dna
    Other atoms: Cl (1);
  22. 6o93 (Na: 1) - D-Alanyl Transferase Dltd From Enterococcus Faecalis
    Other atoms: Cl (3);
  23. 6o9h (Na: 2) - Mouse Ecd with FAB1
  24. 6obh (Na: 6) - Structure of Hiv-1 Ca 1/2-Hexamer
  25. 6oe6 (Na: 2) - Structure of A Uncharacterized Protein From Leptospira Interrogans Serogroup Icterohaemorrhagiae Serovar Copenhageni (Strain Fiocruz L1- 130)
  26. 6of5 (Na: 5) - The Crystal Structure of Dodecyloxy(Naphthalen-1-Yl)Methylphosphonic Acid in Complex with Red Kidney Bean Purple Acid Phosphatase
    Other atoms: Zn (4); Fe (4);
  27. 6ofd (Na: 5) - The Crystal Structure of Octadecyloxy(Naphthalen-1-Yl)Methylphosphonic Acid in Complex with Red Kidney Bean Purple Acid Phosphatase
    Other atoms: Zn (4); Fe (4); Cl (1);
  28. 6ok1 (Na: 2) - LTP2-CHSH2(DUF35) Aldolase
    Other atoms: Zn (2); Cl (7);
  29. 6okf (Na: 2) - Crosslinked Crystal Structure of Type II Fatty Acid Synthase Ketosynthase, Fabb, and C16-Crypto Acyl Carrier Protein, Acpp
  30. 6okg (Na: 1) - Crosslinked Crystal Structure of Type II Fatty Acid Synthase Ketosynthase, Fabf, and C16-Crypto Acyl Carrier Protein, Acpp
  31. 6okz (Na: 7) - Structure of Vcindy Bound to Fumarate
  32. 6ol0 (Na: 6) - Structure of Vcindy Bound to Malate
  33. 6ol1 (Na: 8) - Structure of Vcindy in Complex with Succinate
  34. 6ol8 (Na: 2) - Crystal Structure of Ndm-12 Metallo-Beta-Lactamase in Complex with Hydrolyzed Ampicillin
    Other atoms: Cl (5); Zn (4);
  35. 6ome (Na: 4) - Crystal Structure of A Probable Cytosol Aminopeptidase (Leucine Aminopeptidase, Lap) From Chlamydia Trachomatis D/Uw-3/Cx
    Other atoms: Cl (2); Zn (2);
  36. 6omg (Na: 5) - Structure of Mouse CD1D- Glc-Dag (Sn-1 C18:0, Sn-2 C18:1C9)-Inkt Tcr Ternary Complex
  37. 6on9 (Na: 1) - Crystal Structure of the Zig-8-Rig-5 IG1-IG1 Heterodimer, Tetragonal Form
  38. 6ont (Na: 2) - Structure of the Francisella Response Regulator 1452 Receiver Domain
    Other atoms: Ca (1); Cl (1);
  39. 6oog (Na: 1) - Crystal Structure of Triosephosphate Isomerase From Taenia Solium in Complex with 2PG
  40. 6ooi (Na: 8) - Crystal Structure of Triosephosphate Isomerase From Schistosoma Mansoni in Complex with 2PG
    Other atoms: Cl (6);
Page generated: Sun Dec 15 11:40:39 2024

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