Atomistry » Sodium » PDB 6g3o-6gn6
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Sodium in PDB, part 199 (files: 7921-7960), PDB 6g3o-6gn6

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 7921-7960 (PDB 6g3o-6gn6).
  1. 6g3o (Na: 3) - Crystal Structure of Human HDAC2 in Complex with (R)-6-[3,4-Dioxo-2- (4-Trifluoromethoxy-Phenylamino)-Cyclobut-1-Enylamino]-Heptanoic Acid Hydroxyamide
    Other atoms: F (9); Zn (3); Ca (3);
  2. 6g3r (Na: 2) - Structure of Tellurium-Centred Anderson-Evans Polyoxotungstate (Tew) Bound to the Nucleotide Binding Domain of HSP70. Structure One of Two Tew-HSP70 Structures Deposited.
    Other atoms: W (6); Te (1); Mg (1);
  3. 6g3s (Na: 3) - Structure of Tellurium-Centred Anderson-Evans Polyoxotungstate (Tew) Bound to the Nucleotide Binding Domain of HSP70. Second Structure of Two Tew-HSP70 Structures Deposited.
    Other atoms: W (24); Te (4); Mg (1);
  4. 6g46 (Na: 3) - Red Kidney Bean Purple Acid Phosphatase in Complex with 2-(Naphthalen- 1-Yl)Thiazole-4-Carboxylic Acid
    Other atoms: Fe (4); Zn (4);
  5. 6g4l (Na: 1) - 17BETA-Hydroxysteroid Dehydrogenase Type 14 Mutant Y253A in Complex with A Non-Steroidal Inhibitor
    Other atoms: F (2);
  6. 6g4o (Na: 1) - Non-Aged Form of Torpedo Californica Acetylcholinesterase Inhibited By Tabun Analog Nedpa Bound to Uncharged Reactivator 1
    Other atoms: Cl (8);
  7. 6g58 (Na: 6) - Structure of the Alanine Racemase From Staphylococcus Aureus in Complex with A Pyridoxal 5' Phosphate-Derivative
    Other atoms: Cl (1);
  8. 6g59 (Na: 4) - Structure of the Alanine Racemase From Staphylococcus Aureus in Complex with An Pyridoxal-6- Phosphate Derivative
    Other atoms: Cl (2);
  9. 6g5c (Na: 5) - Interaction of TIO2 Nanoparticles (Nm-101) with Lysozyme
    Other atoms: Ti (1); Cl (2);
  10. 6g5w (Na: 1) - Crystal Structure of KDM4A with Compound Yp-03-038
    Other atoms: Ni (4); Zn (2);
  11. 6g6x (Na: 2) - 14-3-3SIGMA in Complex with A P129BETA3P Mutated Yap PS127 Phosphopeptide
    Other atoms: Cl (4);
  12. 6g7o (Na: 3) - Crystal Structure of Human Alkaline Ceramidase 3 (ACER3) at 2.7 Angstrom Resolution
    Other atoms: Mg (2); Zn (1); Ca (1);
  13. 6g8a (Na: 1) - Lysozyme Solved By Native Sad From A Dataset Collected in 5 Seconds at 1 A Wavelength with Jungfrau Detector
    Other atoms: Cl (17);
  14. 6g8b (Na: 1) - E. Coli Aminopeptidase N Solved By Native Sad From A Dataset Collected in 60 Second with Jungfrau Detector
    Other atoms: Zn (1); Br (1);
  15. 6g8i (Na: 2) - 14-3-3SIGMA in Complex with A R124BETA3R Mutated Yap PS127 Phosphopeptide
    Other atoms: Mg (1); Cl (1);
  16. 6g8j (Na: 1) - 14-3-3SIGMA in Complex with A A130BETA3A Mutated Yap PS127 Phosphopeptide
    Other atoms: Mg (1); Cl (1);
  17. 6g8k (Na: 1) - 14-3-3SIGMA in Complex with A S131BETA3S Mutated Yap PS127 Phosphopeptide
    Other atoms: Mg (1); Cl (2);
  18. 6g8l (Na: 1) - 14-3-3SIGMA in Complex with A L132BETA3L Mutated Yap PS127 Phosphopeptide
    Other atoms: Mg (1); Cl (1);
  19. 6g8q (Na: 3) - 14-3-3SIGMA in Complex with A A130BETA3A and Q133BETA3Q Mutated Yap PS127 Phosphopeptide
    Other atoms: Ca (1); Cl (2);
  20. 6gaq (Na: 2) - Crystal Structure of Oxidised Flavodoxin 2 From Bacillus Cereus
    Other atoms: Ca (3);
  21. 6gas (Na: 4) - Crystal Structure of Oxidised Ferredoxin/Flavodoxin Nadp+ Oxidoreductase 2 (FNR2) From Bacillus Cereus
  22. 6gbn (Na: 4) - Crystal Structure of S-Adenosyl-L-Homocysteine Hydrolase From Cytophaga Hutchinsonii in Complex with Adenosine
  23. 6gbt (Na: 1) - 17BETA-Hydroxysteroid Dehydrogenase Type 14 Mutant Y253A in Complex with A Non-Steroidal Inhibitor
    Other atoms: F (1);
  24. 6gbw (Na: 2) - Thrombin in Complex with MI2100 ((S)-N-(2-(Aminomethyl)-5- Chlorobenzyl)-1-((Benzylsulfonyl)-L-Arginyl)Pyrrolidine-2- Carboxamide)
    Other atoms: Cl (1);
  25. 6gcv (Na: 4) - Ligand Binding Domain (Lbd) of the P. Aeruginosa Nitrate Receptor Mcpn
  26. 6gd1 (Na: 4) - Structure of Hur RRM3
  27. 6gd3 (Na: 1) - Structure of Hur RRM3 in Complex with Rna (Uauuua)
  28. 6gdy (Na: 1) - Crystal Structure of 2OG Oxygenase JMJD6 (Aa 1-343) in Complex with Fe(II) and 2OG
    Other atoms: Fe (2);
  29. 6ged (Na: 1) - Adhesin Domain of Prgb From Enterococcus Faecalis Bound to Dna
  30. 6geh (Na: 24) - Structure and Reactivity of A Siderophore-Interacting Protein From the Marine Bacterium Shewanella Reveals Unanticipated Functional Versatility.
    Other atoms: Mg (4);
  31. 6ghg (Na: 6) - Variable Heavy - Variable Light Domain and Fab-Arm Crossmabs with Charged Residue Exchanges
  32. 6ghj (Na: 1) - Peptst in Complex with Tripeptide Phe-Ala-Gln
  33. 6ghp (Na: 2) - 14-3-3SIGMA in Complex with A TASK3 Peptide Stabilized By Semi- Synthetic Natural Product Fc-Nac
    Other atoms: Cl (1);
  34. 6ghs (Na: 1) - Modification Dependent Tagi Restriction Endonuclease
    Other atoms: Zn (1);
  35. 6gjf (Na: 10) - Ancestral Endocellulase CEL5A
  36. 6gl4 (Na: 2) - Structure of GLUA2O Ligand-Binding Domain (S1S2J) in Complex with Glutamate and Sodium Bromide at 1.95 A Resolution
    Other atoms: Br (6);
  37. 6gl6 (Na: 2) - Apo [Fefe]-Hydrogenase HYDA1 From Chlamydomonas Reinhardtii, Variant C377H
    Other atoms: Fe (4); Cl (1);
  38. 6gm5 (Na: 1) - [Fefe]-Hydrogenase HYDA1 From Chlamydomonas Reinhardtii,Variant E141A
    Other atoms: Fe (4); Cl (1);
  39. 6gm6 (Na: 1) - [Fefe]-Hydrogenase HYDA1 From Chlamydomonas Reinhardtii,Variant E141Q
    Other atoms: Fe (4); Cl (1);
  40. 6gn6 (Na: 2) - Alpha-L-Fucosidase Isoenzyme 1 From Paenibacillus Thiaminolyticus
Page generated: Sat Sep 25 14:50:42 2021

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