Sodium in PDB, part 199 (files: 7921-7960),
PDB 6g3o-6gn6
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 7921-7960 (PDB 6g3o-6gn6).
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6g3o (Na: 3) - Crystal Structure of Human HDAC2 in Complex with (R)-6-[3,4-Dioxo-2- (4-Trifluoromethoxy-Phenylamino)-Cyclobut-1-Enylamino]-Heptanoic Acid Hydroxyamide
Other atoms:
F (9);
Zn (3);
Ca (3);
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6g3r (Na: 2) - Structure of Tellurium-Centred Anderson-Evans Polyoxotungstate (Tew) Bound to the Nucleotide Binding Domain of HSP70. Structure One of Two Tew-HSP70 Structures Deposited.
Other atoms:
W (6);
Te (1);
Mg (1);
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6g3s (Na: 3) - Structure of Tellurium-Centred Anderson-Evans Polyoxotungstate (Tew) Bound to the Nucleotide Binding Domain of HSP70. Second Structure of Two Tew-HSP70 Structures Deposited.
Other atoms:
W (24);
Te (4);
Mg (1);
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6g46 (Na: 3) - Red Kidney Bean Purple Acid Phosphatase in Complex with 2-(Naphthalen- 1-Yl)Thiazole-4-Carboxylic Acid
Other atoms:
Fe (4);
Zn (4);
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6g4l (Na: 1) - 17BETA-Hydroxysteroid Dehydrogenase Type 14 Mutant Y253A in Complex with A Non-Steroidal Inhibitor
Other atoms:
F (2);
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6g4o (Na: 1) - Non-Aged Form of Torpedo Californica Acetylcholinesterase Inhibited By Tabun Analog Nedpa Bound to Uncharged Reactivator 1
Other atoms:
Cl (8);
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6g58 (Na: 6) - Structure of the Alanine Racemase From Staphylococcus Aureus in Complex with A Pyridoxal 5' Phosphate-Derivative
Other atoms:
Cl (1);
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6g59 (Na: 4) - Structure of the Alanine Racemase From Staphylococcus Aureus in Complex with An Pyridoxal-6- Phosphate Derivative
Other atoms:
Cl (2);
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6g5c (Na: 5) - Interaction of TIO2 Nanoparticles (Nm-101) with Lysozyme
Other atoms:
Ti (1);
Cl (2);
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6g5w (Na: 1) - Crystal Structure of KDM4A with Compound Yp-03-038
Other atoms:
Ni (4);
Zn (2);
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6g6x (Na: 2) - 14-3-3SIGMA in Complex with A P129BETA3P Mutated Yap PS127 Phosphopeptide
Other atoms:
Cl (4);
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6g7o (Na: 3) - Crystal Structure of Human Alkaline Ceramidase 3 (ACER3) at 2.7 Angstrom Resolution
Other atoms:
Mg (2);
Zn (1);
Ca (1);
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6g8a (Na: 1) - Lysozyme Solved By Native Sad From A Dataset Collected in 5 Seconds at 1 A Wavelength with Jungfrau Detector
Other atoms:
Cl (17);
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6g8b (Na: 1) - E. Coli Aminopeptidase N Solved By Native Sad From A Dataset Collected in 60 Second with Jungfrau Detector
Other atoms:
Zn (1);
Br (1);
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6g8i (Na: 2) - 14-3-3SIGMA in Complex with A R124BETA3R Mutated Yap PS127 Phosphopeptide
Other atoms:
Mg (1);
Cl (1);
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6g8j (Na: 1) - 14-3-3SIGMA in Complex with A A130BETA3A Mutated Yap PS127 Phosphopeptide
Other atoms:
Mg (1);
Cl (1);
-
6g8k (Na: 1) - 14-3-3SIGMA in Complex with A S131BETA3S Mutated Yap PS127 Phosphopeptide
Other atoms:
Mg (1);
Cl (2);
-
6g8l (Na: 1) - 14-3-3SIGMA in Complex with A L132BETA3L Mutated Yap PS127 Phosphopeptide
Other atoms:
Mg (1);
Cl (1);
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6g8q (Na: 3) - 14-3-3SIGMA in Complex with A A130BETA3A and Q133BETA3Q Mutated Yap PS127 Phosphopeptide
Other atoms:
Ca (1);
Cl (2);
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6gaq (Na: 2) - Crystal Structure of Oxidised Flavodoxin 2 From Bacillus Cereus
Other atoms:
Ca (3);
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6gas (Na: 4) - Crystal Structure of Oxidised Ferredoxin/Flavodoxin Nadp+ Oxidoreductase 2 (FNR2) From Bacillus Cereus
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6gbn (Na: 4) - Crystal Structure of S-Adenosyl-L-Homocysteine Hydrolase From Cytophaga Hutchinsonii in Complex with Adenosine
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6gbt (Na: 1) - 17BETA-Hydroxysteroid Dehydrogenase Type 14 Mutant Y253A in Complex with A Non-Steroidal Inhibitor
Other atoms:
F (1);
-
6gbw (Na: 2) - Thrombin in Complex with MI2100 ((S)-N-(2-(Aminomethyl)-5- Chlorobenzyl)-1-((Benzylsulfonyl)-L-Arginyl)Pyrrolidine-2- Carboxamide)
Other atoms:
Cl (1);
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6gcv (Na: 4) - Ligand Binding Domain (Lbd) of the P. Aeruginosa Nitrate Receptor Mcpn
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6gd1 (Na: 4) - Structure of Hur RRM3
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6gd3 (Na: 1) - Structure of Hur RRM3 in Complex with Rna (Uauuua)
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6gdy (Na: 1) - Crystal Structure of 2OG Oxygenase JMJD6 (Aa 1-343) in Complex with Fe(II) and 2OG
Other atoms:
Fe (2);
-
6ged (Na: 1) - Adhesin Domain of Prgb From Enterococcus Faecalis Bound to Dna
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6geh (Na: 24) - Structure and Reactivity of A Siderophore-Interacting Protein From the Marine Bacterium Shewanella Reveals Unanticipated Functional Versatility.
Other atoms:
Mg (4);
-
6ghg (Na: 6) - Variable Heavy - Variable Light Domain and Fab-Arm Crossmabs with Charged Residue Exchanges
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6ghj (Na: 1) - Peptst in Complex with Tripeptide Phe-Ala-Gln
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6ghp (Na: 2) - 14-3-3SIGMA in Complex with A TASK3 Peptide Stabilized By Semi- Synthetic Natural Product Fc-Nac
Other atoms:
Cl (1);
-
6ghs (Na: 1) - Modification Dependent Tagi Restriction Endonuclease
Other atoms:
Zn (1);
-
6gjf (Na: 10) - Ancestral Endocellulase CEL5A
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6gl4 (Na: 2) - Structure of GLUA2O Ligand-Binding Domain (S1S2J) in Complex with Glutamate and Sodium Bromide at 1.95 A Resolution
Other atoms:
Br (6);
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6gl6 (Na: 2) - Apo [Fefe]-Hydrogenase HYDA1 From Chlamydomonas Reinhardtii, Variant C377H
Other atoms:
Fe (4);
Cl (1);
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6gm5 (Na: 1) - [Fefe]-Hydrogenase HYDA1 From Chlamydomonas Reinhardtii,Variant E141A
Other atoms:
Fe (4);
Cl (1);
-
6gm6 (Na: 1) - [Fefe]-Hydrogenase HYDA1 From Chlamydomonas Reinhardtii,Variant E141Q
Other atoms:
Fe (4);
Cl (1);
-
6gn6 (Na: 2) - Alpha-L-Fucosidase Isoenzyme 1 From Paenibacillus Thiaminolyticus
Page generated: Thu Dec 28 11:26:28 2023
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