Sodium in PDB 6gbt: 17BETA-Hydroxysteroid Dehydrogenase Type 14 Mutant Y253A in Complex with A Non-Steroidal Inhibitor

The structure of 17BETA-Hydroxysteroid Dehydrogenase Type 14 Mutant Y253A in Complex with A Non-Steroidal Inhibitor, PDB code: 6gbt was solved by M.Badran, G.Klebe, A.Heine, S.Marchais-Oberwinkler, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	46.60 / 2.10
Space group	I 4 2 2
Cell size a, b, c (Å), α, β, γ (°)	91.654, 91.654, 134.099, 90.00, 90.00, 90.00
R / Rfree (%)	15 / 19

The structure of 17BETA-Hydroxysteroid Dehydrogenase Type 14 Mutant Y253A in Complex with A Non-Steroidal Inhibitor also contains other interesting chemical elements:

Fluorine

(F)

1 atom

The binding sites of Sodium atom in the 17BETA-Hydroxysteroid Dehydrogenase Type 14 Mutant Y253A in Complex with A Non-Steroidal Inhibitor (pdb code 6gbt). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the 17BETA-Hydroxysteroid Dehydrogenase Type 14 Mutant Y253A in Complex with A Non-Steroidal Inhibitor, PDB code: 6gbt:

Sodium binding site 1 out of 1 in the 17BETA-Hydroxysteroid Dehydrogenase Type 14 Mutant Y253A in Complex with A Non-Steroidal Inhibitor


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of 17BETA-Hydroxysteroid Dehydrogenase Type 14 Mutant Y253A in Complex with A Non-Steroidal Inhibitor within 5.0Å range: probe atom residue distance (Å) B Occ A:Na304 b:34.2 occ:1.00 O A:HOH539 2.4 47.8 1.0 O A:LEU53 2.4 23.2 1.0 O A:HOH466 2.4 41.9 1.0 O A:GLU50 2.4 24.3 1.0 O A:ALA56 2.6 26.4 1.0 C A:LEU53 3.4 28.6 1.0 C A:GLU50 3.5 24.2 1.0 C A:ALA56 3.7 24.9 1.0 CA A:PRO54 3.8 32.1 1.0 O A:HOH527 3.9 50.1 1.0 N A:ALA56 3.9 26.0 1.0 N A:PRO54 4.0 32.0 1.0 CA A:GLU50 4.0 23.4 1.0 N A:GLY55 4.0 29.8 1.0 CG A:GLU50 4.1 32.8 1.0 C A:PRO54 4.3 26.2 1.0 CA A:ALA56 4.3 24.7 1.0 N A:LEU53 4.5 23.2 1.0 CA A:LEU53 4.6 22.9 1.0 CB A:GLU50 4.6 27.2 1.0 N A:GLN51 4.7 22.9 1.0 CB A:ALA56 4.8 23.9 1.0 N A:VAL57 4.8 25.1 1.0 C A:GLY55 4.9 29.6 1.0 CA A:GLN51 5.0 23.6 1.0

M.J.Badran, M.Badran, G.Klebe, A.Heine, S.Marchais-Oberwinkler. N/A N/A.