Atomistry » Sodium » PDB 6c2q-6cm1
Atomistry »
  Sodium »
    PDB 6c2q-6cm1 »
      6c2q »
      6c2z »
      6c3k »
      6c39 »
      6c4p »
      6c4k »
      6c5b »
      6c67 »
      6c6e »
      6c6f »
      6c7w »
      6c7x »
      6c86 »
      6c89 »
      6c96 »
      6c9n »
      6c9p »
      6c9r »
      6c9s »
      6c9u »
      6c9v »
      6caw »
      6cbk »
      6cbv »
      6cc6 »
      6cdb »
      6cdj »
      6cdl »
      6cdq »
      6cek »
      6cgf »
      6chk »
      6chr »
      6cih »
      6cl5 »
      6cly »
      6clz »
      6cm1 »
      6cfq »
      6c6c »

Sodium in PDB, part 190 (files: 7561-7600), PDB 6c2q-6cm1

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 7561-7600 (PDB 6c2q-6cm1).
  1. 6c2q (Na: 1) - Crystal Structures of Cystathionine Beta-Synthase From Saccharomyces Cerevisiae: the Structure of the Plp-L-Serine Intermediate
    Other atoms: Ca (1); Cl (1);
  2. 6c2z (Na: 1) - Crystal Structures of Cystathionine Beta-Synthase From Saccharomyces Cerevisiae: the Structure of the Plp-Aminoacrylate Intermediate
    Other atoms: Ca (1); Cl (1);
  3. 6c39 (Na: 2) - Apo Crystal Structure of Wild-Type S. Aureus Penicillin Binding Protein 4 (PBP4)
    Other atoms: Zn (5);
  4. 6c3k (Na: 2) - Apo Crystal Structure of S. Aureus Penicillin Binding Protein 4 (PBP4) Mutant (E183A, F241R)
    Other atoms: Zn (5); Cl (2);
  5. 6c4k (Na: 1) - Full Length Hugdh with A104L Substitution in the Absence of Ligand
  6. 6c4p (Na: 1) - Crystal Structures of Cystathionine Beta-Synthase From Saccharomyces Cerevisiae: the Structure of the Pmp Complex
    Other atoms: Ca (1); Cl (1);
  7. 6c5b (Na: 3) - Crystal Structure Analysis of Laphzm
  8. 6c67 (Na: 2) - Mycobacterium Tuberculosis Adenosine Kinase Bound to Iodotubercidin
    Other atoms: I (4);
  9. 6c6c (Na: 2) - Structure of Glycolipid Agsa[20,6P] in Complex with Mouse CD1D
  10. 6c6e (Na: 2) - Structure of Glycolipid Agsa[26,6P] in Complex with Mouse CD1D
  11. 6c6f (Na: 2) - Structure of Glycolipid Agsa[26,P5P] in Complex with Mouse CD1D
  12. 6c7w (Na: 1) - Carbonic Anhydrase 2 in Complex with [(2R,3S,4R,5R)-5-(6-Amino-9H- Purin-9-Yl)-3,4-Dihydroxytetrahydro-2-Furanyl]Methyl Sulfamate Inhibitor
    Other atoms: Zn (1);
  13. 6c7x (Na: 1) - Carbonic Anhydrase 2 in Complex with 2-Chloro-5'-O-Sulfamoyladenosine
    Other atoms: Cl (1); Zn (1);
  14. 6c86 (Na: 1) - Crystal Structure of Lysyl-Trna Synthetase From Cryptosporidium Parvum Complexed with L-Lysylsulfamoyl Adenosine
    Other atoms: Cl (1);
  15. 6c89 (Na: 2) - Ndm-1 Beta-Lactamase Exhibits Differential Active Site Sequence Requirements For the Hydrolysis of Penicillin Versus Carbapenem Antibiotics
    Other atoms: Zn (8); Cl (2);
  16. 6c96 (Na: 2) - Cryo-Em Structure of Mouse TPC1 Channel in the Apo State
  17. 6c9n (Na: 2) - Mycobacterium Tuberculosis Adenosine Kinase Bound to Sangivamycin
  18. 6c9p (Na: 2) - Mycobacterium Tuberculosis Adenosine Kinase Bound to 6- Methylmercaptopurine Riboside
  19. 6c9r (Na: 2) - Mycobacterium Tuberculosis Adenosine Kinase Bound to (2R,3S,4R,5R)-2- (Hydroxymethyl)-5-(6-(Thiophen-3-Yl)-9H-Purin-9-Yl)Tetrahydrofuran-3, 4-Diol
  20. 6c9s (Na: 2) - Mycobacterium Tuberculosis Adenosine Kinase Bound to (2R,3R,4S,5R)-2- (6-([1,1'-Biphenyl]-4-Ylethynyl)-9H-Purin-9-Yl)-5-(Hydroxymethyl) Tetrahydrofuran-3,4-Diol
  21. 6c9u (Na: 2) - Crystal Structure of [KS3][AT3] Didomain From Module 3 of 6- Deoxyerthronolide B Synthase in Complex with Antibody Fragment (Fab)
    Other atoms: K (1);
  22. 6c9v (Na: 2) - Mycobacterium Tuberculosis Adenosine Kinase Bound to (2R,3S,4R,5R)-2- (Hydroxymethyl)-5-(6-(4-Phenylpiperazin-1-Yl)-9H-Purin-9-Yl) Tetrahydrofuran-3,4-Diol
  23. 6caw (Na: 2) - Crystal Structure of the W95F Variant of Catalase-Peroxidase From B. Pseudomallei
    Other atoms: Fe (2);
  24. 6cbk (Na: 1) - X-Ray Structure of Neob From Streptomyces Fradiae in Complex with Pmp
  25. 6cbv (Na: 1) - Crystal Structure of Bril Bound to An Affinity Matured Synthetic Antibody.
  26. 6cc6 (Na: 2) - Crystal Structure of the W202F Variant of Catalase-Peroxidase From B. Pseudomallei
    Other atoms: Fe (2);
  27. 6cdb (Na: 1) - Crystal Structure of V66L Czra in the Zn(II)Bound State
    Other atoms: Cl (4); Zn (2);
  28. 6cdj (Na: 1) - Hiv-1 Wild Type Protease with Grl-03314A, 6-5-5-Ring Fused Umbrella- Like Tetrahydropyranofuran As the P2-Ligand, A Cyclopropylaminobenzothiazole As the P2'-Ligand and 3,5- Difluorophenylmethyl As the P1-Ligand
    Other atoms: F (4); Cl (3);
  29. 6cdl (Na: 1) - Hiv-1 Wild Type Protease with Grl-03214A, 6-5-5-Ring Fused Umbrella- Like Tetrahydropyranofuran As the P2-Ligand, A Cyclopropylaminobenzothiazole As the P2'-Ligand and 3,5- Difluorophenylmethyl As the P1-Ligand
    Other atoms: F (4); Cl (2);
  30. 6cdq (Na: 2) - Crystal Structure of the W202F Variant of Catalase-Peroxidase From B. Pseudomallei with Inh Bound.
    Other atoms: Fe (2); Cl (2);
  31. 6cek (Na: 2) - Crystal Structure of the D141N Variant of Catalase-Peroxidase From B. Pseudomallei
    Other atoms: Fe (2); Cl (2);
  32. 6cfq (Na: 2) - Crystal Structure of the D141N Variant of Catalase-Peroxidase From B. Pseudomallei with Inh Bound
    Other atoms: Fe (2); Cl (2);
  33. 6cgf (Na: 1) - Crystal Structure of Hiv-1 Y188L Mutant Reverse Transcriptase in Complex with Non-Nucleoside Inhibitor K-5A2
    Other atoms: Mg (1);
  34. 6chk (Na: 1) - Crystal Structure of Laci Family Transcriptional Regulator From Lactobacillus Casei, Target Efi-512911, with Bound Tris
    Other atoms: Cl (1);
  35. 6chr (Na: 9) - Crystal Structure of A Group II Intron Lariat with An Intact 3' Splice Site (Pre-2S State)
    Other atoms: Mg (82);
  36. 6cih (Na: 9) - Crystal Structure of A Group II Intron Lariat in the Post-Catalytic State
    Other atoms: Mg (86); Ir (41);
  37. 6cl5 (Na: 6) - Structure of P. Aeruginosa R1 Pyocin Fiber PALES_06171 Comprising C- Terminal Residues 323-701
    Other atoms: Mg (2); Fe (2);
  38. 6cly (Na: 2) - Structure of Human Dna Polymerase Beta Complexed with 8-Clg As the Template Base in A 1-Nucleotide Gapped Dna
    Other atoms: Cl (1);
  39. 6clz (Na: 15) - MT1-Mmp Hpx Domain with Blade 4 Loop Bound to Nanodiscs
    Other atoms: Cl (15);
  40. 6cm1 (Na: 15) - MT1-Mmp Hpx Domain with Blade 2 Loop Bound to Nanodiscs
    Other atoms: Cl (15);
Page generated: Tue Dec 1 10:45:40 2020

Last articles

Xe in 6AYK
Xe in 6QII
Xe in 6ASM
Xe in 5NSW
Xe in 6FY9
Xe in 5O1K
Xe in 5O27
Xe in 5M69
Xe in 5KPU
Xe in 5I63
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy