Atomistry » Sodium » PDB 6c0l-6cgf
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Sodium in PDB, part 190 (files: 7561-7600), PDB 6c0l-6cgf

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 7561-7600 (PDB 6c0l-6cgf).
  1. 6c0l (Na: 1) - Crystal Structure of Hiv-1 E138K Mutant Reverse Transcriptase in Complex with Non-Nucleoside Inhibitor K-5A2
    Other atoms: Mg (1);
  2. 6c12 (Na: 2) - Sdha-Sdhe Complex
  3. 6c15 (Na: 1) - CD1C in Complex with Phosphatidylcholine
  4. 6c1k (Na: 4) - Hypopp Mutant with LIGAND1
  5. 6c1m (Na: 4) - Navab Normopp Mutant
  6. 6c1r (Na: 1) - Crystal Structure of Human C5A Receptor in Complex with An Orthosteric Antagonist PMX53 and An Allosteric Antagonist Avacopan
    Other atoms: F (4);
  7. 6c2h (Na: 1) - Crystal Structures of Cystathionine Beta-Synthase From Saccharomyces Cerevisiae: the Structure of the Catalytic Core
    Other atoms: Ca (1); Cl (1);
  8. 6c2q (Na: 1) - Crystal Structures of Cystathionine Beta-Synthase From Saccharomyces Cerevisiae: the Structure of the Plp-L-Serine Intermediate
    Other atoms: Ca (1); Cl (1);
  9. 6c2z (Na: 1) - Crystal Structures of Cystathionine Beta-Synthase From Saccharomyces Cerevisiae: the Structure of the Plp-Aminoacrylate Intermediate
    Other atoms: Ca (1); Cl (1);
  10. 6c39 (Na: 2) - Apo Crystal Structure of Wild-Type S. Aureus Penicillin Binding Protein 4 (PBP4)
    Other atoms: Zn (5);
  11. 6c3k (Na: 2) - Apo Crystal Structure of S. Aureus Penicillin Binding Protein 4 (PBP4) Mutant (E183A, F241R)
    Other atoms: Zn (5); Cl (2);
  12. 6c4k (Na: 1) - Full Length Hugdh with A104L Substitution in the Absence of Ligand
  13. 6c4p (Na: 1) - Crystal Structures of Cystathionine Beta-Synthase From Saccharomyces Cerevisiae: the Structure of the Pmp Complex
    Other atoms: Ca (1); Cl (1);
  14. 6c5b (Na: 3) - Crystal Structure Analysis of Laphzm
  15. 6c67 (Na: 2) - Mycobacterium Tuberculosis Adenosine Kinase Bound to Iodotubercidin
    Other atoms: I (4);
  16. 6c6c (Na: 2) - Structure of Glycolipid Agsa[20,6P] in Complex with Mouse CD1D
  17. 6c6e (Na: 2) - Structure of Glycolipid Agsa[26,6P] in Complex with Mouse CD1D
  18. 6c6f (Na: 2) - Structure of Glycolipid Agsa[26,P5P] in Complex with Mouse CD1D
  19. 6c7w (Na: 1) - Carbonic Anhydrase 2 in Complex with [(2R,3S,4R,5R)-5-(6-Amino-9H- Purin-9-Yl)-3,4-Dihydroxytetrahydro-2-Furanyl]Methyl Sulfamate Inhibitor
    Other atoms: Zn (1);
  20. 6c7x (Na: 1) - Carbonic Anhydrase 2 in Complex with 2-Chloro-5'-O-Sulfamoyladenosine
    Other atoms: Cl (1); Zn (1);
  21. 6c86 (Na: 1) - Crystal Structure of Lysyl-Trna Synthetase From Cryptosporidium Parvum Complexed with L-Lysylsulfamoyl Adenosine
    Other atoms: Cl (1);
  22. 6c89 (Na: 2) - Ndm-1 Beta-Lactamase Exhibits Differential Active Site Sequence Requirements For the Hydrolysis of Penicillin Versus Carbapenem Antibiotics
    Other atoms: Zn (8); Cl (2);
  23. 6c96 (Na: 2) - Cryo-Em Structure of Mouse TPC1 Channel in the Apo State
  24. 6c9n (Na: 2) - Mycobacterium Tuberculosis Adenosine Kinase Bound to Sangivamycin
  25. 6c9p (Na: 2) - Mycobacterium Tuberculosis Adenosine Kinase Bound to 6- Methylmercaptopurine Riboside
  26. 6c9r (Na: 2) - Mycobacterium Tuberculosis Adenosine Kinase Bound to (2R,3S,4R,5R)-2- (Hydroxymethyl)-5-(6-(Thiophen-3-Yl)-9H-Purin-9-Yl)Tetrahydrofuran-3, 4-Diol
  27. 6c9s (Na: 2) - Mycobacterium Tuberculosis Adenosine Kinase Bound to (2R,3R,4S,5R)-2- (6-([1,1'-Biphenyl]-4-Ylethynyl)-9H-Purin-9-Yl)-5-(Hydroxymethyl) Tetrahydrofuran-3,4-Diol
  28. 6c9u (Na: 2) - Crystal Structure of [KS3][AT3] Didomain From Module 3 of 6- Deoxyerthronolide B Synthase in Complex with Antibody Fragment (Fab)
    Other atoms: K (1);
  29. 6c9v (Na: 2) - Mycobacterium Tuberculosis Adenosine Kinase Bound to (2R,3S,4R,5R)-2- (Hydroxymethyl)-5-(6-(4-Phenylpiperazin-1-Yl)-9H-Purin-9-Yl) Tetrahydrofuran-3,4-Diol
  30. 6caw (Na: 2) - Crystal Structure of the W95F Variant of Catalase-Peroxidase From B. Pseudomallei
    Other atoms: Fe (2);
  31. 6cbk (Na: 1) - X-Ray Structure of Neob From Streptomyces Fradiae in Complex with Pmp
  32. 6cbv (Na: 1) - Crystal Structure of Bril Bound to An Affinity Matured Synthetic Antibody.
  33. 6cc6 (Na: 2) - Crystal Structure of the W202F Variant of Catalase-Peroxidase From B. Pseudomallei
    Other atoms: Fe (2);
  34. 6cdb (Na: 1) - Crystal Structure of V66L Czra in the Zn(II)Bound State
    Other atoms: Cl (4); Zn (2);
  35. 6cdj (Na: 1) - Hiv-1 Wild Type Protease with Grl-03314A, 6-5-5-Ring Fused Umbrella- Like Tetrahydropyranofuran As the P2-Ligand, A Cyclopropylaminobenzothiazole As the P2'-Ligand and 3,5- Difluorophenylmethyl As the P1-Ligand
    Other atoms: F (4); Cl (3);
  36. 6cdl (Na: 1) - Hiv-1 Wild Type Protease with Grl-03214A, 6-5-5-Ring Fused Umbrella- Like Tetrahydropyranofuran As the P2-Ligand, A Cyclopropylaminobenzothiazole As the P2'-Ligand and 3,5- Difluorophenylmethyl As the P1-Ligand
    Other atoms: F (4); Cl (2);
  37. 6cdq (Na: 2) - Crystal Structure of the W202F Variant of Catalase-Peroxidase From B. Pseudomallei with Inh Bound.
    Other atoms: Fe (2); Cl (2);
  38. 6cek (Na: 2) - Crystal Structure of the D141N Variant of Catalase-Peroxidase From B. Pseudomallei
    Other atoms: Fe (2); Cl (2);
  39. 6cfq (Na: 2) - Crystal Structure of the D141N Variant of Catalase-Peroxidase From B. Pseudomallei with Inh Bound
    Other atoms: Fe (2); Cl (2);
  40. 6cgf (Na: 1) - Crystal Structure of Hiv-1 Y188L Mutant Reverse Transcriptase in Complex with Non-Nucleoside Inhibitor K-5A2
    Other atoms: Mg (1);
Page generated: Fri Dec 24 09:51:49 2021

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