Sodium in PDB 6cbv: Crystal Structure of Bril Bound to An Affinity Matured Synthetic Antibody.

The structure of Crystal Structure of Bril Bound to An Affinity Matured Synthetic Antibody., PDB code: 6cbv was solved by S.Mukherjee, B.Skrobek, A.A.Kossiakoff, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	19.85 / 1.87
Space group	P 65
Cell size a, b, c (Å), α, β, γ (°)	87.954, 87.954, 159.107, 90.00, 90.00, 120.00
R / Rfree (%)	19.4 / 22.5

The binding sites of Sodium atom in the Crystal Structure of Bril Bound to An Affinity Matured Synthetic Antibody. (pdb code 6cbv). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of Bril Bound to An Affinity Matured Synthetic Antibody., PDB code: 6cbv:

Sodium binding site 1 out of 1 in the Crystal Structure of Bril Bound to An Affinity Matured Synthetic Antibody.


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of Bril Bound to An Affinity Matured Synthetic Antibody. within 5.0Å range: probe atom residue distance (Å) B Occ L:Na301 b:46.1 occ:1.00 OD2 L:ASP187 2.6 49.4 1.0 O L:HOH527 2.8 38.6 1.0 O L:HOH510 2.8 43.6 1.0 N L:SER184 2.9 37.9 1.0 CA L:LEU183 3.4 37.6 1.0 CG L:ASP187 3.4 48.5 1.0 OG L:SER184 3.5 39.0 1.0 CB L:ASP187 3.6 43.1 1.0 C L:LEU183 3.6 35.3 1.0 CB L:LEU183 3.9 41.1 1.0 CB L:SER184 3.9 37.0 1.0 CD2 L:LEU183 3.9 44.4 1.0 CA L:SER184 3.9 37.5 1.0 O L:HOH404 4.2 58.9 1.0 O L:HOH531 4.3 45.7 1.0 O L:HOH518 4.3 42.4 1.0 CG L:LEU183 4.5 43.0 1.0 O L:THR182 4.5 35.6 1.0 OD1 L:ASP187 4.6 51.9 1.0 N L:LEU183 4.7 36.8 1.0 O L:SER184 4.7 40.3 1.0 O L:LEU183 4.8 36.7 1.0 C L:SER184 4.8 38.2 1.0 CA L:ASP187 5.0 43.8 1.0

S.Mukherjee, S.K.Erramilli, J.Coukos, B.Skrobek, K.Radziwon, P.Dutka, Y.M.Sung, Y.Kang, X.Gao, E.Xu, A.A.Kossiakoff. Crystal Strutcure of Bril Bound to An Affinity Matured Synthetic Antibody. To Be Published.