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Sodium in PDB, part 152 (files: 6041-6080), PDB 5jid-5k8r

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 6041-6080 (PDB 5jid-5k8r).
  1. 5jid (Na: 1) - Crystal Structure of Human Transthyretin in Complex with Perfluorooctanoic Acid (Pfoa)
    Other atoms: F (30);
  2. 5jif (Na: 2) - Crystal Structure of Mouse Hepatitis Virus Strain Dvim Hemagglutinin- Esterase
  3. 5jil (Na: 1) - Crystal Structure of Rat Coronavirus Strain New-Jersey Hemagglutinin- Esterase in Complex with 4N-Acetyl Sialic Acid
    Other atoms: Zn (1);
  4. 5jim (Na: 1) - Crystal Structure of Human Transthyretin in Complex with Perfluoroktansulfonsyra (Pfos)
    Other atoms: F (34);
  5. 5jiq (Na: 1) - Crystal Structure of Human Transthyretin in Complex with 2,2',4,4'- Tetrahydroxybenzophenone (BP2)
  6. 5jix (Na: 1) - Pkg II'S Carboxyl Terminal Cyclic Nucleotide Binding Domain (Cnb-B) in A Complex with 8-Br-Cgmp
    Other atoms: Br (1); Ca (4);
  7. 5jmo (Na: 2) - X-Ray Structure of Furin in Complex with the Inhibitory Antibody NB14
    Other atoms: Ca (6);
  8. 5jos (Na: 1) - Crystal Structure of An Ancestral Cyclohexadienyl Dehydratase, Anccdt- 3(P188L).
  9. 5jpg (Na: 1) - Rat Galectin 5 with Lactose
  10. 5jrp (Na: 1) - Crystal Structure of Monoclonal Antibody MR78 Fab
  11. 5jsf (Na: 1) - Crystal Structure of 17BETA-Hydroxysteroid Dehydrogenase 14 S205 Variant in Complex with Nad.
    Other atoms: Cl (1);
  12. 5jui (Na: 1) - Domain-Swapped Dimer of the the KRT10-Binding Region (Br) of Psrp
  13. 5jv4 (Na: 1) - Structure of F420 Binding Protein, MSMEG_6526, From Mycobacterium Smegmatis with F420 Bound
  14. 5jvw (Na: 7) - Crystal Structure of Mithramycin Analogue Mtm Sa-Trp in Complex with A 10-Mer Dna Agaggcctct.
    Other atoms: Zn (13);
  15. 5jwg (Na: 1) - Crystal Structure of Porphyromonas Endodontalis DPP11 in Complex with Dipeptide Arg-Asp
  16. 5jxf (Na: 1) - Crystal Structure of Flavobacterium Psychrophilum DPP11 in Complex with Dipeptide Arg-Asp
    Other atoms: Cl (3);
  17. 5jxg (Na: 8) - Structure of the Unliganded Form of the Proprotein Convertase Furin.
    Other atoms: Cl (1); Ca (3);
  18. 5jxh (Na: 4) - Structure the Proprotein Convertase Furin in Complex with Meta- Guanidinomethyl-Phac-Rvr-Amba at 2.0 Angstrom Resolution.
    Other atoms: Cl (1); Ca (3);
  19. 5jxi (Na: 7) - Structure of the Unliganded Form of the Proprotein Convertase Furin in Presence of Edta.
    Other atoms: Cl (1); Ca (1);
  20. 5jxj (Na: 6) - Structure of the Proprotein Convertase Furin Complexed to Meta- Guanidinomethyl-Phac-Rvr-Amba in Presence of Edta
    Other atoms: Cl (1); Ca (1);
  21. 5jyd (Na: 4) - Crystal Structure of A Putative Short Chain Dehydrogenase From Burkholderia Cenocepacia
    Other atoms: Mg (8); I (54);
  22. 5jyi (Na: 1) - Trypsin Bound with Succinic Acid at 1.9A
    Other atoms: Ca (1);
  23. 5jyx (Na: 3) - Crystal Structure of the Covalent Thioimide Intermediate of the Archaeosine Synthase Quef-Like
  24. 5jzl (Na: 2) - The Structure of Monomeric Ultra Stable Green Fluorescent Protein
    Other atoms: Cl (2);
  25. 5jzy (Na: 2) - Thrombin in Complex with (S)-1-((R)-2-Amino-3-Cyclohexylpropanoyl)-N- (4-Carbamimidoylbenzyl)Pyrrolidine-2-Carboxamide
  26. 5k0c (Na: 4) - Crystal Structure of Comt in Complex with 2,4-Dimethyl-5-[3-(2- Phenylpropan-2-Yl)-1H-Pyrazol-5-Yl]-1,3-Thiazole
  27. 5k0e (Na: 1) - Crystal Structure of Comt in Complex with 2,4-Dimethyl-5-[3-(2- Phenylpropan-2-Yl)-1H-Pyrazol-5-Yl]-1,3-Thiazole
    Other atoms: Cl (1);
  28. 5k0f (Na: 4) - Crystal Structure of Comt in Complex with 5-[5-[1-(4-Methoxyphenyl) Ethyl]-1H-Pyrazol-3-Yl]-2,4-Dimethyl-1,3-Thiazole
  29. 5k0g (Na: 4) - Crystal Structure of Comt in Complex with 4-[5-[1-(4-Methoxyphenyl) Ethyl]-1H-Pyrazol-3-Yl]-1,3-Dimethylpyrazole
  30. 5k0j (Na: 4) - Crystal Structure of Comt in Complex with 5-[5-[1-(4-Methoxyphenyl) Cyclopropyl]-1H-Pyrazol-3-Yl]-2,4-Dimethyl-1,3-Thiazole
  31. 5k2a (Na: 1) - 2.5 Angstrom A2A Adenosine Receptor Structure with Sulfur Sad Phasing Using Xfel Data
  32. 5k2b (Na: 1) - 2.5 Angstrom A2A Adenosine Receptor Structure with Mr Phasing Using Xfel Data
  33. 5k2c (Na: 1) - 1.9 Angstrom A2A Adenosine Receptor Structure with Sulfur Sad Phasing and Phase Extension Using Xfel Data
  34. 5k2d (Na: 1) - 1.9A Angstrom A2A Adenosine Receptor Structure with Mr Phasing Using Xfel Data
  35. 5k4v (Na: 2) - Three-Dimensional Structure of L-Threonine 3-Dehydrogenase From Trypanosoma Brucei Bound to Nad+ Refined to 2.2 Angstroms
  36. 5k4w (Na: 2) - Three-Dimensional Structure of L-Threonine 3-Dehydrogenase From Trypanosoma Brucei Bound to Nadh and L-Threonine Refined to 1.72 Angstroms
  37. 5k4y (Na: 7) - Three-Dimensional Structure of L-Threonine 3-Dehydrogenase From Trypanosoma Brucei Refined to 1.77 Angstroms
    Other atoms: Cl (7);
  38. 5k7o (Na: 1) - Microed Structure of Lysozyme at 1.8 A Resolution
    Other atoms: Cl (2);
  39. 5k8b (Na: 1) - X-Ray Structure of Kdna, 8-Amino-3,8-Dideoxy-Alpha-D-Manno- Octulosonate Transaminase, From Shewanella Oneidensis in the Presence of the External Aldimine with Plp and Glutamate
    Other atoms: Cl (5);
  40. 5k8r (Na: 1) - Structure of Human Clustered Protocadherin Gamma B3 EC1-4
    Other atoms: Cl (2); Ca (9);
Page generated: Tue Dec 1 10:43:20 2020

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