Sodium in PDB, part 144 (files: 5721-5760),
PDB 5f01-5fjc
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 5721-5760 (PDB 5f01-5fjc).
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5f01 (Na: 2) - Crystal Structure of Bace-1 in Complex with (1SR,2SR)-2-((R)-2-Amino- 5,5-Difluoro-4-Methyl-5,6-Dihydro-4H-1,3-Oxazin-4-Yl)-N-(3- Chloroquinolin-8-Yl)Cyclopropanecarboxamide
Other atoms:
F (2);
Cl (1);
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5f0g (Na: 1) - Structure of the Glutathione Transferase Delta 2 From Drosophila Melanogaster
Other atoms:
K (1);
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5f0z (Na: 1) - Crystal Structure of Fructokinase From Vibrio Cholerae O395 in Fructose, Adp and Calcium Ion Bound Form
Other atoms:
Ca (1);
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5f11 (Na: 1) - Crystal Structure of Fructokinase From Vibrio Cholerae O395 in Fructose Bound Form
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5f14 (Na: 1) - Structure of Native Hen Egg-White Lysozyme
Other atoms:
Cl (3);
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5f16 (Na: 1) - Cta-Modified Hen Egg-White Lysozyme
Other atoms:
Cl (3);
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5f2q (Na: 10) - C-Type Lectin From Bothrops Jararacussu
Other atoms:
Ca (10);
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5f31 (Na: 1) - Crystal Structure of Membrane Associated Pata From Mycobacterium Smegmatis in Complex with Palmitate - P 42 21 2 Space Group
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5f71 (Na: 2) - Human T-Cell Immunoglobulin and Mucin Domain Protein 3 (Htim-3)
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5f7k (Na: 1) - Blood Group Antigen Binding Adhesin Baba of Helicobacter Pylori Strain 17875 in Complex with Nanobody Nb-ER19
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5f81 (Na: 1) - Acoustic Injectors For Drop-on-Demand Serial Femtosecond Crystallography
Other atoms:
Cl (5);
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5f8a (Na: 2) - Crystal Structure of the Ternary Ecorv-Dna-Lu Complex with Uncleaved Dna Substrate. Lanthanide Binding to Ecorv-Dna Complex Inhibits Cleavage.
Other atoms:
Lu (2);
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5fa4 (Na: 1) - Structure of Hla-A2:01 with Peptide Y16R
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5fag (Na: 5) - Alanine Racemase From Streptomyces Coelicolor A3(2) with Bound Propionate Inhibitor
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5faj (Na: 6) - Alanine Racemase From Streptomyces Coelicolor A3(2) in Complex with D- Cycloserine
Other atoms:
Cl (5);
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5fav (Na: 3) - E491Q Mutant of Choline Tma-Lyase
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5faw (Na: 2) - T502A Mutant of Choline Tma-Lyase
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5fay (Na: 3) - Y208F Mutant of Choline Tma-Lyase
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5fb9 (Na: 2) - S1 Nuclease From Aspergillus Oryzae with Unoccupied Active Site
Other atoms:
Zn (6);
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5fbb (Na: 3) - S1 Nuclease From Aspergillus Oryzae in Complex with Phosphate and Adenosine 5'-Monophosphate
Other atoms:
Zn (6);
Ca (5);
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5fbf (Na: 1) - S1 Nuclease From Aspergillus Oryzae in Complex with Two Molecules of 2'-Deoxycytidine-5'-Monophosphate
Other atoms:
Zn (3);
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5fcc (Na: 1) - Structure of Hutd From Pseudomonas Fluorescens SBW25 (Nacl Condition)
Other atoms:
Cl (4);
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5fdj (Na: 2) - Hen Egg Lysozyme at Room Temperature Solved From Datasets Acquired By Ultrasonic Acoustic Levitation Method and Processed By Crystfel
Other atoms:
Cl (2);
-
5fek (Na: 2) - Hen Egg Lysozyme at Room Temperature Solved From 3600 Diffraction Images Acquired By Ultrasonic Acoustic Levitation Method and Processed By Crystfel
Other atoms:
Cl (2);
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5fel (Na: 2) - Hen Egg Lysozyme at Room Temperature Solved From Dataset Acquired By Oscillation Method
Other atoms:
Cl (2);
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5ffl (Na: 1) - Crystal Structure of Mouse CD300LF at 1.6 Angstroms Resolution.
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5ffn (Na: 1) - Complex of Subtilase Subty From Bacillus Sp. TY145 with Chymotrypsin Inhibitor CI2A
Other atoms:
Ca (2);
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5ffr (Na: 1) - Crystal Structure of Surfactant Protein-A Complexed with Phosphocholine
Other atoms:
Ca (1);
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5fgw (Na: 2) - Structure of SDA1 Nuclease with Bound Zinc Ion
Other atoms:
Cl (5);
Zn (27);
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5fh0 (Na: 1) - The Structure of Rat Cytosolic Pepck Variant E89A Complex with Gtp
Other atoms:
Mn (3);
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5fh1 (Na: 1) - The Structure of Rat Cytosolic Pepck Variant E89D in Complex with Gtp
Other atoms:
Mn (2);
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5fh2 (Na: 1) - The Structure of Rat Cytosolic Pepck Variant E89Q in Complex with Gtp
Other atoms:
Mn (2);
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5fh3 (Na: 1) - The Structure of Rat Cytosolic Pepck Variant E89A in Complex with Oxalic Acid and Gtp
Other atoms:
Mn (3);
-
5fh4 (Na: 1) - The Structure of Rat Cytosolic Pepck Variant E89D in Complex with Beta-Sulfopyruvate and Gtp
Other atoms:
Mn (3);
-
5fh5 (Na: 1) - The Structure of Rat Cytosolic Pepck Variant E89Q in Complex with Phosphoglycolate and Gdp
Other atoms:
Mn (2);
-
5fht (Na: 1) - HTRA2 Protease Mutant V226K
Other atoms:
K (1);
Cl (1);
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5fhy (Na: 3) - Crystal Structure of Flid (HAP2) From Pseudomonas Aeruginosa PAO1
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5fie (Na: 1) - Crystal Structure of N-Terminal Domain of Shaft Pilin Spaa From Lactobacillus Rhamnosus Gg
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5fj1 (Na: 3) - Structure of the Standard Kink Turn Hmkt-7 As Stem Loop in P212121 Space Group
Other atoms:
Mg (21);
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5fjc (Na: 1) - Sam-I Riboswitch Bearing the H. Marismortui Kt-7 Variant C-2BU
Other atoms:
Mg (2);
K (4);
Ba (21);
Page generated: Sun Dec 15 11:38:10 2024
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