Sodium in PDB 5ffl: Crystal Structure of Mouse CD300LF at 1.6 Angstroms Resolution.

The structure of Crystal Structure of Mouse CD300LF at 1.6 Angstroms Resolution., PDB code: 5ffl was solved by C.A.Nelson, D.H.Fremont, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	19.19 / 1.60
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	27.633, 53.347, 70.516, 90.00, 90.00, 90.00
R / Rfree (%)	16 / 19.6

The binding sites of Sodium atom in the Crystal Structure of Mouse CD300LF at 1.6 Angstroms Resolution. (pdb code 5ffl). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of Mouse CD300LF at 1.6 Angstroms Resolution., PDB code: 5ffl:

Sodium binding site 1 out of 1 in the Crystal Structure of Mouse CD300LF at 1.6 Angstroms Resolution.


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of Mouse CD300LF at 1.6 Angstroms Resolution. within 5.0Å range: probe atom residue distance (Å) B Occ A:Na202 b:30.6 occ:1.00 OD1 A:ASP98 2.3 28.6 1.0 O A:HOH395 2.3 31.6 1.0 O A:LYS94 2.3 29.7 1.0 O A:GLY96 2.4 32.9 1.0 O3S A:EPE201 2.4 34.6 1.0 CG A:ASP98 3.2 31.1 1.0 H A:LYS94 3.3 30.9 1.0 C A:GLY96 3.5 31.2 1.0 C A:LYS94 3.6 32.3 1.0 H A:ASP98 3.6 34.4 1.0 H A:GLY96 3.6 36.1 1.0 S A:EPE201 3.7 32.6 1.0 OD2 A:ASP98 3.7 32.1 1.0 N A:GLY96 3.8 30.1 1.0 H62 A:EPE201 3.8 44.2 1.0 N A:ASP98 3.9 28.7 1.0 O2S A:EPE201 3.9 35.6 1.0 N A:LYS94 4.0 25.7 1.0 HA2 A:GLY95 4.1 39.2 1.0 O A:HOH305 4.1 31.2 1.0 HG3 A:LYS94 4.2 37.0 1.0 HA A:LEU97 4.2 33.8 1.0 C A:GLY95 4.3 30.9 1.0 CB A:ASP98 4.3 26.0 1.0 CA A:GLY96 4.3 34.6 1.0 HA A:ASP98 4.4 32.7 1.0 H102 A:EPE201 4.4 42.6 1.0 HG23 A:THR93 4.4 38.1 1.0 O A:HOH401 4.4 34.6 1.0 CA A:LYS94 4.4 28.8 1.0 CA A:ASP98 4.4 27.3 1.0 C A:LEU97 4.4 32.1 1.0 HA A:THR93 4.5 29.9 1.0 CA A:GLY95 4.5 32.7 1.0 N A:LEU97 4.5 28.9 1.0 N A:GLY95 4.5 34.8 1.0 HB2 A:ASP98 4.6 31.2 1.0 CA A:LEU97 4.6 28.2 1.0 HG2 A:LYS94 4.6 37.0 1.0 O1S A:EPE201 4.6 34.8 1.0 C10 A:EPE201 4.7 35.5 1.0 HA2 A:GLY96 4.8 41.5 1.0 CG A:LYS94 4.8 30.8 1.0 C6 A:EPE201 4.8 36.8 1.0 H61 A:EPE201 4.9 44.2 1.0

R.C.Orchard, C.B.Wilen, J.G.Doench, M.T.Baldridge, B.T.Mccune, Y.C.Lee, S.Lee, S.M.Pruett-Miller, C.A.Nelson, D.H.Fremont, H.W.Virgin. Discovery of A Proteinaceous Cellular Receptor For A Norovirus. Science V. 353 933 2016.
ISSN: ESSN 1095-9203
PubMed: 27540007
DOI: 10.1126/SCIENCE.AAF1220