Atomistry » Sodium » PDB 4rko-4tls
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Sodium in PDB, part 124 (files: 4921-4960), PDB 4rko-4tls

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 4921-4960 (PDB 4rko-4tls).
  1. 4rko (Na: 1) - Crystal Structure of Thrombin Mutant S195T Bound with Ppack
  2. 4rkv (Na: 4) - Structural Variations and Solvent Structure of Uggggu Quadruplexes Stabilized By SR2+ Ions
    Other atoms: Sr (6); Ca (2);
  3. 4rmj (Na: 1) - Human SIRT2 in Complex with Adp Ribose and Nicotinamide
    Other atoms: Zn (2);
  4. 4rne (Na: 6) - Structural Variations and Solvent Structure of Uggggu Quadruplexes Stabilized By SR2+ Ions
    Other atoms: Sr (7); Ca (11);
  5. 4rpx (Na: 7) - Precatalytic Ternary Complex of Human Dna Polymerase Beta with Gapped Dna Containing An 8-Oxo-7,8-Dihydro-Guanine (8-Oxog) and Dctp in the Presence of CACL2
    Other atoms: Ca (2); Cl (3);
  6. 4rpy (Na: 7) - Human Dna Polymerase Beta with Gapped Dna Containing An 8-Oxo-7,8- Dihydro-Guanine(8-Oxog) and Dctp Soaked with MGCL2 For 30 S
    Other atoms: Mg (3); Cl (4);
  7. 4rpz (Na: 4) - Human Dna Polymerase Beta with Gapped Dna Containing An 8-Oxo-7,8- Dihydro-Guanine (8-Oxog)and Dctp Soaked with MGCL2 For 60 S
    Other atoms: Mg (3); Cl (3);
  8. 4rq0 (Na: 3) - Human Dna Polymerase Beta with Gapped Dna Containing An 8-Oxo-7,8- Dihydro-Guanine (8-Oxog)and Dctp Soaked with MGCL2 For 80 S
    Other atoms: Mg (2); Cl (2);
  9. 4rq1 (Na: 2) - Human Dna Polymerase Beta with Gapped Dna Containing An 8-Oxo-7,8- Dihydro-Guanine(8-Oxog) and Dctp Soaked with MGCL2 For 1HR
  10. 4rq2 (Na: 7) - Human Dna Polymerase Beta with Gapped Dna Containing An 8-Oxo-7,8- Dihydro-Guanine (8-Oxog)and Dctp Soaked with MNCL2 For 35 S
    Other atoms: Mn (6);
  11. 4rq3 (Na: 4) - Precatalytic Ternary Complex of Human Dna Polymerase Beta with Gapped Dna Containing An 8-Oxo-7,8-Dihydro-Guanine (8-Oxog) and Datp in the Presence of CACL2
    Other atoms: Ca (2); Cl (4);
  12. 4rq4 (Na: 2) - Human Dna Polymerase Beta with Gapped Dna Containing An 8-Oxo-7,8- Dihydro-Guanine(8-Oxog) and Datp Soaked with MGCL2 For 30 S
    Other atoms: Mg (3); Cl (5);
  13. 4rq5 (Na: 2) - Human Dna Polymerase Beta with Gapped Dna Containing An 8-Oxo-7,8- Dihydro-Guanine (8-Oxog)and Datp Soaked with MGCL2 For 60 S
    Other atoms: Mg (3); Cl (2);
  14. 4rq6 (Na: 3) - Human Dna Polymerase Beta with Gapped Dna Containing An 8-Oxo-7,8- Dihydro-Guanine(8-Oxog) and Datp Soaked with MGCL2 For 80 S
    Other atoms: Mg (2);
  15. 4rq7 (Na: 4) - Human Dna Polymerase Beta with Gapped Dna Containing An 8-Oxo-7,8- Dihydro-Guanine (8-Oxog)and Datp Soaked with MGCL2 For 1HR
    Other atoms: Cl (2);
  16. 4rq8 (Na: 9) - Human Dna Polymerase Beta with Gapped Dna Containing An 8-Oxo-7,8- Dihydro-Guanine(8-Oxog) and Datp Soaked with MNCL2 For 35 S
    Other atoms: Mn (6); Cl (6);
  17. 4rqa (Na: 1) - Crystal Structure of A Hypoxanthine Phosphoribosyltransferase (Target Id Nysgrc-029686) From Staphylococcus Aureus (Orthorhombic Space Group)
    Other atoms: Cl (5);
  18. 4rso (Na: 1) - The Structure of the Neurotropic Aavrh.8 Viral Vector
    Other atoms: Cl (1);
  19. 4rsr (Na: 1) - Arsm Arsenic(III) S-Adenosylmethionine Methyltransferase with Trivalent Phenyl Arsencial Derivative-Roxarsone
    Other atoms: Mg (1); As (1); Ca (2);
  20. 4rt1 (Na: 1) - Structure of the ALG44 Pilz Domain (R95A Mutant) From Pseudomonas Aeruginosa PAO1 in Complex with C-Di-Gmp
    Other atoms: Cl (1);
  21. 4rt2 (Na: 3) - Ternary Complex Crystal Structure of Dna Polymerase Beta with (Alpha, Beta)-CH2-(Beta,Gamma)-Nh-Dttp
    Other atoms: Mg (1); Cl (1);
  22. 4rt3 (Na: 3) - Ternary Complex Crystal Structure of Dna Polymerase Beta with (Alpha, Beta)-Nh-(Beta,Gamma)-CH2-Dttp
    Other atoms: Mg (1); Cl (3);
  23. 4ru4 (Na: 21) - Crystal Structure of the Tailspike Protein GP49 From Pseudomonas Phage LKA1
    Other atoms: Ca (8);
  24. 4ru5 (Na: 10) - Crystal Structure of the Pseudomonas Phage PHI297 Tailspike GP61
    Other atoms: Ca (6);
  25. 4rw0 (Na: 2) - Crystal Structure of A Member of the Lipolytic Protein G-D-S-L Family From Veillonella Parvula Dsm 2008
  26. 4rw1 (Na: 1) - Hen Egg-White Lysozyme Structure From A Spent-Beam Experiment at Lcls: Original Beam
    Other atoms: Cl (1);
  27. 4rw2 (Na: 1) - Hen Egg-White Lysozyme Structure From A Spent-Beam Experiment at Lcls: Refocused Beam
    Other atoms: Cl (1);
  28. 4rwd (Na: 2) - Xfel Structure of the Human Delta Opioid Receptor in Complex with A Bifunctional Peptide
  29. 4rwy (Na: 1) - Crystal Structure of VH1-46 Germline-Derived CD4-Binding Site-Directed Antibody 8ANC131 in Complex with Hiv-1 Clade B YU2 GP120
  30. 4ryd (Na: 6) - X-Ray Structure of Human Furin in Complex with the Competitive Inhibitor Para-Guanidinomethyl-Phac-R-Tle-R-Amba
    Other atoms: Ca (18);
  31. 4ryf (Na: 14) - CLPP1/2 Heterocomplex From Listeria Monocytogenes
  32. 4rzm (Na: 3) - Crystal Structure of the LSD19-Lasalocid A Complex
    Other atoms: Cl (1);
  33. 4rzr (Na: 2) - Bypass of A Bulky Adduct DG1,8 By DPO4
    Other atoms: Ca (4);
  34. 4s0n (Na: 4) - Crystal Structure of Hltf Hiran Domain Bound to Dna
  35. 4s2l (Na: 3) - Crystal Structure of Oxa-163 Beta-Lactamase
  36. 4tkx (Na: 2) - Structure of Protease
    Other atoms: Pb (1); K (1);
  37. 4tl5 (Na: 1) - Crystal Structure of Human Transthyretin SER85PRO Mutant
    Other atoms: Cl (1);
  38. 4tlh (Na: 2) - Monoclinic Crystal Structure of Eutl From Clostridium Perfringens
    Other atoms: Cl (1);
  39. 4tlk (Na: 2) - Crystal Structure of Human Transthyretin SER85PRO/GLU92PRO Mutant
  40. 4tls (Na: 1) - Crystal Structure of Human Transthyretin GLU92PRO Mutant
Page generated: Fri Dec 24 09:46:48 2021

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