Atomistry » Sodium » PDB 4jtk-4khq
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Sodium in PDB, part 108 (files: 4281-4320), PDB 4jtk-4khq

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 4281-4320 (PDB 4jtk-4khq).
  1. 4jtk (Na: 1) - Crystal Structure of R117Q Mutant of 3-Deoxy-D-Manno-Octulosonate 8- Phosphate Synthase (KDO8PS) From Neisseria Meningitidis
    Other atoms: Cl (4);
  2. 4jvl (Na: 3) - Crystal Structure of Human Estrogen Sulfotransferase (SULT1E1) in Complex with Inactive Cofactor Pap and Estradiol (E2)
  3. 4jvm (Na: 3) - Crystal Structure of Human Estrogen Sulfotransferase (SULT1E1) in Complex with Inactive Cofactor Pap and Brominated Flame Retardant Tbbpa (Tetrabromobisphenol A)
    Other atoms: Br (8);
  4. 4jvn (Na: 2) - Crystal Structure of Human Estrogen Sulfotransferase (SULT1E1) in Complex with Inactive Cofactor Pap and Metabolite of Brominated Flame Retardant 3OH BDE47 (3-Hydroxyl Bromodiphenyl Ether)
    Other atoms: Br (6);
  5. 4jwm (Na: 2) - Ternary Complex of D256E Mutant of Dna Polymerase Beta
    Other atoms: Mg (2); Cl (4);
  6. 4jwn (Na: 2) - Ternary Complex of D256A Mutant of Dna Polymerase Beta
    Other atoms: Mg (1); Cl (4);
  7. 4jzb (Na: 2) - Crystal Structure of Leshmaniasis Major Farnesyl Diphosphate Synthase in Complex with 1-(2-Hydroxy-2,2-Diphosphonoethyl)-3- Phenylpyridinium, Ipp and CA2+
    Other atoms: Ca (6);
  8. 4jzy (Na: 1) - Crystal Structures of Drosophila Cryptochrome
  9. 4jzz (Na: 6) - Crystal Structure of CD4-Mimetic Miniprotein M48U1 in Complex with Hiv-1 YU2 GP120 in C2221 Space Group
  10. 4k0d (Na: 1) - Periplasmic Sensor Domain of Sensor Histidine Kinase, ADEH_2942
    Other atoms: Cl (4); Zn (5);
  11. 4k0w (Na: 5) - X-Ray Crystal Structure of Oxa-23 A220 Duplication Clinical Variant
  12. 4k10 (Na: 6) - Crystal Structure of Leshmaniasis Major Farnesyl Diphosphate Synthase in Complex with 3-Fluoro-1-(2-Hydroxy-2,2-Diphosphonoethyl)Pyridinium and MG2+
    Other atoms: F (4); Mg (8);
  13. 4k19 (Na: 2) - The Structure of Human Siderocalin Bound to the Bacterial Siderophore Fluvibactin
    Other atoms: Fe (3); Cl (2);
  14. 4k28 (Na: 1) - 2.15 Angstrom Resolution Crystal Structure of A Shikimate Dehydrogenase Family Protein From Pseudomonas Putida KT2440 in Complex with Nad+
    Other atoms: Mn (6);
  15. 4k3i (Na: 4) - Crystal Structure of the Quinol Form of Methylamine Dehydrogenase in Complex with the Diferrous Form of Maug, C2 Space Group
    Other atoms: Fe (4); Ca (2);
  16. 4k6a (Na: 1) - Revised Crystal Structure of Apo-Form of Triosephosphate Isomerase (Tpia) From Escherichia Coli at 1.8 Angstrom Resolution.
  17. 4k6o (Na: 4) - X-Ray Structure Uridine Phosphorylase From Vibrio Cholerae in Complex with 6-Methyluracil at 1.17 A Resolution
    Other atoms: Mg (16); Cl (12);
  18. 4k6v (Na: 1) - Crystal Structure of AD37 Fiber Knob in Complex with Trivalent Sialic Acid Inhibitor ME0407
    Other atoms: Cl (3); Zn (3);
  19. 4k70 (Na: 21) - Crystal Structure of N-Terminal Half of Pseudorabiesvirus UL37 Protein
    Other atoms: Ni (1); Ca (6); Cl (5);
  20. 4k7t (Na: 1) - Structure of the Ternary Complex of Bacitracin, Zinc, and Geranyl- Pyrophosphate
    Other atoms: Zn (1);
  21. 4k7v (Na: 2) - OYE1-W116A Complexed with (R)-Carvone
    Other atoms: Mg (1); Cl (1);
  22. 4k7x (Na: 1) - Crystal Structure of A 4-Hydroxyproline Epimerase From Burkholderia Multivorans, Target Efi-506479, with Bound Phosphate, Closed Domains
    Other atoms: Cl (1);
  23. 4k7y (Na: 1) - OYE1-W116T
    Other atoms: Mg (3); Cl (2);
  24. 4k8e (Na: 4) - OYE1-W116V Complexed with the Aromatic Product of (R)-Carvone Dismutation
    Other atoms: Mg (2); Cl (2);
  25. 4k8h (Na: 2) - OYE1-W116V Complexed with (R)-Carvone
    Other atoms: Cl (2);
  26. 4ka7 (Na: 1) - Structure of Organellar Oligopeptidase (E572Q) in Complex with An Endogenous Substrate
    Other atoms: Cl (1); Zn (1);
  27. 4ka8 (Na: 1) - Structure of Organellar Oligopeptidase
    Other atoms: Cl (1); Zn (1);
  28. 4ka9 (Na: 2) - Crystal Structure Analysis of Single Amino Acid Deletion Mutations in Egfp
    Other atoms: Zn (2);
  29. 4kaa (Na: 2) - Crystal Structure of the HALOTAG2 Protein at the Resolution 2.3A, Northeast Structural Genomics Consortium (Nesg) Target OR150
  30. 4kaf (Na: 6) - Crystal Structure of Haloalkane Dehalogenase HALOTAG7 at the Resolution 1.5A, Northeast Structural Genomics Consortium (Nesg) Target OR151
  31. 4kaj (Na: 2) - X-Ray Structure of the Complex of Haloalkane Dehalogenase HALOTAG7 with Halts, Northeast Structural Genomics Consortium (Nesg) Target OR151
    Other atoms: Mn (2);
  32. 4kav (Na: 2) - Crystal Structure of the Soluble Domain of Lipooligosaccharide Phosphoethanolamine Transferase A From Neisseria Meningitidis
    Other atoms: Mg (1); Zn (1); Cu (1);
  33. 4kb9 (Na: 1) - Crystal Structure of Wild-Type Hiv-1 Protease with Novel Tricyclic P2- Ligands Grl-0739A
    Other atoms: Cl (2);
  34. 4kbf (Na: 2) - Two Different Open Conformations of the Helicase Core of the Rna Helicase Hera
  35. 4kbo (Na: 1) - Crystal Structure of the Human Mortalin (GRP75) Atpase Domain in the Apo Form
  36. 4kca (Na: 2) - Crystal Structure of Endo-1,5-Alpha-L-Arabinanase From A Bovine Ruminal Metagenomic Library
    Other atoms: I (63);
  37. 4kfm (Na: 1) - Crystal Structure of the G Protein-Gated Inward Rectifier K+ Channel GIRK2 (KIR3.2) in Complex with the Beta-Gamma G Protein Subunits
    Other atoms: K (5);
  38. 4kgh (Na: 1) - Crystal Structure of Human SPLUNC1 Lacking the Secretion Signal Sequence
  39. 4khn (Na: 1) - Crystal Structure of the Ternary Complex of the D714A Mutant of RB69 Dna Polymerase
    Other atoms: Ca (2);
  40. 4khq (Na: 8) - Ternary Complex of RB69 Mutant L415F Wit Dumpnpp
    Other atoms: Ca (3);
Page generated: Fri Dec 24 09:45:35 2021

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