Sodium in PDB, part 106 (files: 4201-4240),
PDB 4j0p-4jer
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 4201-4240 (PDB 4j0p-4jer).
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4j0p (Na: 2) - Crystal Structure of Bace-1 in Complex with 5-Cyano-Pyridine-2- Carboxylic Acid [3-((S)-2-Amino-4-Methyl-5,6-Dihydro-4H-[1,3]Oxazin- 4-Yl)-4-Fluoro-Phenyl]-Amide
Other atoms:
F (1);
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4j0t (Na: 2) - Crystal Structure of Bace-1 in Complex with 5-Ethoxy-Pyridine-2- Carboxylic Acid [3-((R)-2-Amino-5,5-Difluoro-4-Methyl-5,6-Dihydro-4H- [1,3]Oxazin-4-Yl)-4-Fluoro-Phenyl]-Amide
Other atoms:
F (3);
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4j0v (Na: 2) - Crystal Structure of Bace-1 in Complex with 5-Cyano-Pyridine-2- Carboxylic Acid [3-((4R,5R)-2-Amino-5-Fluoro-4-Methyl-5,6-Dihydro-4H- [1,3]Oxazin-4-Yl)-4-Fluoro-Phenyl]-Amide
Other atoms:
F (2);
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4j0y (Na: 2) - Crystal Structure of Bace-1 in Complex with 5-Cyano-Pyridine-2- Carboxylic Acid [3-((4R,5S)-2-Amino-5-Fluoro-4-Methyl-5,6-Dihydro-4H- [1,3]Oxazin-4-Yl)-4-Fluoro-Phenyl]-Amide
Other atoms:
F (2);
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4j0z (Na: 2) - Crystal Structure of Bace-1 in Complex with 5-Cyano-Pyridine-2- Carboxylic Acid [3-((4S,5R)-2-Amino-5-Fluoro-4-Fluoromethyl-5,6- Dihydro-4H-[1,3]Oxazin-4-Yl)-4-Fluoro-Phenyl]-Amide
Other atoms:
F (3);
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4j17 (Na: 2) - Crystal Structure of Bace-1 in Complex with 5-Cyano-Pyridine-2- Carboxylic Acid [3-((S)-2-Amino-4-Difluoromethyl-5,6-Dihydro-4H-[1, 3]Oxazin-4-Yl)-4-Fluoro-Phenyl]-Amide
Other atoms:
F (3);
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4j1a (Na: 1) - X-Ray Structure of the Adduct Between Hen Egg White Lysozyme and Aziru (Green Crystal)
Other atoms:
Ru (1);
Cl (3);
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4j1b (Na: 1) - X-Ray Structure of the Adduct Between Hen Egg White Lysozyme and Aziru (Black Crystal)
Other atoms:
Ru (1);
Cl (2);
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4j1c (Na: 2) - Crystal Structure of Bace-1 in Complex with 5-Cyano-Pyridine-2- Carboxylic Acid [3-((S)-2-Amino-5,5-Difluoro-4-Fluoromethyl-5,6- Dihydro-4H-[1,3]Oxazin-4-Yl)-4-Fluoro-Phenyl]-Amide
Other atoms:
F (4);
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4j1e (Na: 2) - Crystal Structure of Bace-1 in Complex with 5-Cyano-Pyridine-2- Carboxylic Acid [3-((4S,6S)-2-Amino-4-Fluoromethyl-6-Trifluoromethyl- 5,6-Dihydro-4H-[1,3]Oxazin-4-Yl)-4-Fluoro-Phenyl]-Amide
Other atoms:
F (5);
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4j1f (Na: 2) - Crystal Structure of Bace-1 in Complex with 5-Cyano-Pyridine-2- Carboxylic Acid [3-((4S,6S)-2-Amino-4-Methyl-6-Trifluoromethyl-5,6- Dihydro-4H-[1,3]Oxazin-4-Yl)-4-Fluoro-Phenyl]-Amide
Other atoms:
F (4);
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4j1h (Na: 2) - Crystal Structure of Bace-1 in Complex with 5-Cyano-Pyridine-2- Carboxylic Acid [3-((4S,6R)-2-Amino-4-Methyl-6-Trifluoromethyl-5,6- Dihydro-4H-[1,3]Oxazin-4-Yl)-4-Fluoro-Phenyl]-Amide
Other atoms:
F (4);
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4j1i (Na: 2) - Crystal Structure of Bace-1 in Complex with 5-Cyano-Pyridine-2- Carboxylic Acid [3-((4R,5R,6R)-2-Amino-5-Fluoro-4-Methyl-6- Trifluoromethyl-5,6-Dihydro-4H-[1,3]Oxazin-4-Yl)-4-Fluoro-Phenyl]- Amide
Other atoms:
F (5);
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4j1k (Na: 2) - Crystal Structure of Bace-1 in Complex with 5-Cyano-Pyridine-2- Carboxylic Acid [3-((4R,5R,6S)-2-Amino-5-Fluoro-4-Methyl-6- Trifluoromethyl-5,6-Dihydro-4H-[1,3]Oxazin-4-Yl)-4-Fluoro-Phenyl]- Amide
Other atoms:
F (5);
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4j20 (Na: 1) - X-Ray Structure of the Cytochrome C-554 From Chlorobaculum Tepidum
Other atoms:
Fe (2);
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4j2h (Na: 1) - Crystal Structure of A Putative Short-Chain Alcohol Dehydrogenase From Sinorhizobium Meliloti 1021 (Target Nysgrc-011708)
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4j3f (Na: 5) - Crystal Structure of Fabi From F. Tularensis in Complex with Novel Inhibitors Based on the Benzimidazole Scaffold.
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4j3g (Na: 2) - Crystal Structure of Ribosomal-Protein-Alanine N-Acetyltransferase From Brucella Melitensis
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4j3i (Na: 1) - X-Ray Crystal Structure of Bromodomain Complex to 1.24 A Resolution
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4j43 (Na: 2) - Pyld Holoenzyme
Other atoms:
Mg (2);
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4j49 (Na: 2) - Pyld Holoenzyme Soaked with L-Lysine-Ne-D-Ornithine
Other atoms:
Mg (2);
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4j4b (Na: 2) - Pyld in Complex with L-Lysine-Ne-D-Ornithine and Nadh
Other atoms:
Mg (2);
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4j4h (Na: 4) - Pyld in Complex with Pyrroline-Carboxy-Lysine and Nadh
Other atoms:
Mg (4);
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4j4s (Na: 8) - Triple Mutant Sftavn
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4j4t (Na: 3) - Crystal Structure of Fabi From F. Tularensis in Complex with Novel Inhibitors Based on the Benzimidazole Scaffold
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4j5y (Na: 2) - Crystal Structure of Hfq From Pseudomonas Aeruginosa in Complex with Atp
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4j6w (Na: 3) - Crystal Structure of Hfq From Pseudomonas Aeruginosa in Complex with Ctp
Other atoms:
Mg (8);
Cl (2);
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4j7v (Na: 1) - Crystal Structure of Cross-Linked Hen Egg White Lysozyme Soaked with 5MM [Ru(Benzene)CL2]2
Other atoms:
Ru (1);
Cl (7);
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4j9m (Na: 1) - Human Dna Polymerase Eta-Dna Ternary Complex: Misincorporation G Opposite T After An A at the Primer 3' End (Aa/G)
Other atoms:
Mg (2);
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4j9w (Na: 2) - Crystal Structure of the Complex of A Hydroxyproline Epimerase (Target Efi-506499, Pseudomonas Fluorescens Pf-5) with the Inhibitor Pyrrole- 2-Carboxylate
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4j9x (Na: 2) - Crystal Structure of the Complex of A Hydroxyproline Epimerase (Target Efi-506499, Pseudomonas Fluorescens Pf-5) with Trans-4-Hydroxy-L- Proline
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4jan (Na: 2) - Crystal Structure of Broadly Neutralizing Antibody CH103 in Complex with Hiv-1 GP120
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4jb3 (Na: 1) - Crystal Structure of BT_0970, A Had Family Phosphatase From Bacteroides Thetaiotaomicron Vpi-5482, Target Efi-501083, with Bound Sodium and Glycerol, Closed Lid, Ordered Loop
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4jci (Na: 1) - Crystal Structure of CSAL_2705, A Putative Hydroxyproline Epimerase From Chromohalobacter Salexigens (Target Efi-506486), Space Group P212121, Unliganded
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4jcm (Na: 1) - Crystal Structure of Gamma-Cgtase From Alkalophilic Bacillus Clarkii at 1.65 Angstrom Resolution
Other atoms:
Cl (13);
Ca (6);
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4jco (Na: 26) - 1.7 A Resolution Structure of Wild Type Malate Dehydrogenase From Haloarcula Marismortui
Other atoms:
Cl (13);
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4jd0 (Na: 8) - Structure of the Inositol-1-Phosphate Ctp Transferase From T. Maritima.
Other atoms:
As (1);
Cl (1);
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4jd5 (Na: 1) - Crystal Structure of Benzoylformate Decarboxylase Mutant L403E
Other atoms:
Ca (2);
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4jdo (Na: 3) - Secreted Chlamydial Protein PGP3, Coiled-Coil Deletion
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4jer (Na: 1) - 1.1A Resolution Apo Structure of the Hemophore Hasa From Yersinia Pestis (Tetragonal Form)
Page generated: Sun Dec 15 11:36:46 2024
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