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Sodium in PDB, part 106 (files: 4201-4240), PDB 4j0n-4jdo

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 4201-4240 (PDB 4j0n-4jdo).
  1. 4j0n (Na: 3) - Crystal Structure of A Manganese Dependent Isatin Hydrolase
    Other atoms: Mn (2); Ca (1);
  2. 4j0p (Na: 2) - Crystal Structure of Bace-1 in Complex with 5-Cyano-Pyridine-2- Carboxylic Acid [3-((S)-2-Amino-4-Methyl-5,6-Dihydro-4H-[1,3]Oxazin- 4-Yl)-4-Fluoro-Phenyl]-Amide
    Other atoms: F (1);
  3. 4j0t (Na: 2) - Crystal Structure of Bace-1 in Complex with 5-Ethoxy-Pyridine-2- Carboxylic Acid [3-((R)-2-Amino-5,5-Difluoro-4-Methyl-5,6-Dihydro-4H- [1,3]Oxazin-4-Yl)-4-Fluoro-Phenyl]-Amide
    Other atoms: F (3);
  4. 4j0v (Na: 2) - Crystal Structure of Bace-1 in Complex with 5-Cyano-Pyridine-2- Carboxylic Acid [3-((4R,5R)-2-Amino-5-Fluoro-4-Methyl-5,6-Dihydro-4H- [1,3]Oxazin-4-Yl)-4-Fluoro-Phenyl]-Amide
    Other atoms: F (2);
  5. 4j0y (Na: 2) - Crystal Structure of Bace-1 in Complex with 5-Cyano-Pyridine-2- Carboxylic Acid [3-((4R,5S)-2-Amino-5-Fluoro-4-Methyl-5,6-Dihydro-4H- [1,3]Oxazin-4-Yl)-4-Fluoro-Phenyl]-Amide
    Other atoms: F (2);
  6. 4j0z (Na: 2) - Crystal Structure of Bace-1 in Complex with 5-Cyano-Pyridine-2- Carboxylic Acid [3-((4S,5R)-2-Amino-5-Fluoro-4-Fluoromethyl-5,6- Dihydro-4H-[1,3]Oxazin-4-Yl)-4-Fluoro-Phenyl]-Amide
    Other atoms: F (3);
  7. 4j17 (Na: 2) - Crystal Structure of Bace-1 in Complex with 5-Cyano-Pyridine-2- Carboxylic Acid [3-((S)-2-Amino-4-Difluoromethyl-5,6-Dihydro-4H-[1, 3]Oxazin-4-Yl)-4-Fluoro-Phenyl]-Amide
    Other atoms: F (3);
  8. 4j1a (Na: 1) - X-Ray Structure of the Adduct Between Hen Egg White Lysozyme and Aziru (Green Crystal)
    Other atoms: Ru (1); Cl (3);
  9. 4j1b (Na: 1) - X-Ray Structure of the Adduct Between Hen Egg White Lysozyme and Aziru (Black Crystal)
    Other atoms: Ru (1); Cl (2);
  10. 4j1c (Na: 2) - Crystal Structure of Bace-1 in Complex with 5-Cyano-Pyridine-2- Carboxylic Acid [3-((S)-2-Amino-5,5-Difluoro-4-Fluoromethyl-5,6- Dihydro-4H-[1,3]Oxazin-4-Yl)-4-Fluoro-Phenyl]-Amide
    Other atoms: F (4);
  11. 4j1e (Na: 2) - Crystal Structure of Bace-1 in Complex with 5-Cyano-Pyridine-2- Carboxylic Acid [3-((4S,6S)-2-Amino-4-Fluoromethyl-6-Trifluoromethyl- 5,6-Dihydro-4H-[1,3]Oxazin-4-Yl)-4-Fluoro-Phenyl]-Amide
    Other atoms: F (5);
  12. 4j1f (Na: 2) - Crystal Structure of Bace-1 in Complex with 5-Cyano-Pyridine-2- Carboxylic Acid [3-((4S,6S)-2-Amino-4-Methyl-6-Trifluoromethyl-5,6- Dihydro-4H-[1,3]Oxazin-4-Yl)-4-Fluoro-Phenyl]-Amide
    Other atoms: F (4);
  13. 4j1h (Na: 2) - Crystal Structure of Bace-1 in Complex with 5-Cyano-Pyridine-2- Carboxylic Acid [3-((4S,6R)-2-Amino-4-Methyl-6-Trifluoromethyl-5,6- Dihydro-4H-[1,3]Oxazin-4-Yl)-4-Fluoro-Phenyl]-Amide
    Other atoms: F (4);
  14. 4j1i (Na: 2) - Crystal Structure of Bace-1 in Complex with 5-Cyano-Pyridine-2- Carboxylic Acid [3-((4R,5R,6R)-2-Amino-5-Fluoro-4-Methyl-6- Trifluoromethyl-5,6-Dihydro-4H-[1,3]Oxazin-4-Yl)-4-Fluoro-Phenyl]- Amide
    Other atoms: F (5);
  15. 4j1k (Na: 2) - Crystal Structure of Bace-1 in Complex with 5-Cyano-Pyridine-2- Carboxylic Acid [3-((4R,5R,6S)-2-Amino-5-Fluoro-4-Methyl-6- Trifluoromethyl-5,6-Dihydro-4H-[1,3]Oxazin-4-Yl)-4-Fluoro-Phenyl]- Amide
    Other atoms: F (5);
  16. 4j20 (Na: 1) - X-Ray Structure of the Cytochrome C-554 From Chlorobaculum Tepidum
    Other atoms: Fe (2);
  17. 4j2h (Na: 1) - Crystal Structure of A Putative Short-Chain Alcohol Dehydrogenase From Sinorhizobium Meliloti 1021 (Target Nysgrc-011708)
  18. 4j3f (Na: 5) - Crystal Structure of Fabi From F. Tularensis in Complex with Novel Inhibitors Based on the Benzimidazole Scaffold.
  19. 4j3g (Na: 2) - Crystal Structure of Ribosomal-Protein-Alanine N-Acetyltransferase From Brucella Melitensis
  20. 4j3i (Na: 1) - X-Ray Crystal Structure of Bromodomain Complex to 1.24 A Resolution
  21. 4j43 (Na: 2) - Pyld Holoenzyme
    Other atoms: Mg (2);
  22. 4j49 (Na: 2) - Pyld Holoenzyme Soaked with L-Lysine-Ne-D-Ornithine
    Other atoms: Mg (2);
  23. 4j4b (Na: 2) - Pyld in Complex with L-Lysine-Ne-D-Ornithine and Nadh
    Other atoms: Mg (2);
  24. 4j4h (Na: 4) - Pyld in Complex with Pyrroline-Carboxy-Lysine and Nadh
    Other atoms: Mg (4);
  25. 4j4s (Na: 8) - Triple Mutant Sftavn
  26. 4j4t (Na: 3) - Crystal Structure of Fabi From F. Tularensis in Complex with Novel Inhibitors Based on the Benzimidazole Scaffold
  27. 4j5y (Na: 2) - Crystal Structure of Hfq From Pseudomonas Aeruginosa in Complex with Atp
  28. 4j6w (Na: 3) - Crystal Structure of Hfq From Pseudomonas Aeruginosa in Complex with Ctp
    Other atoms: Mg (8); Cl (2);
  29. 4j7v (Na: 1) - Crystal Structure of Cross-Linked Hen Egg White Lysozyme Soaked with 5MM [Ru(Benzene)CL2]2
    Other atoms: Ru (1); Cl (7);
  30. 4j9m (Na: 1) - Human Dna Polymerase Eta-Dna Ternary Complex: Misincorporation G Opposite T After An A at the Primer 3' End (Aa/G)
    Other atoms: Mg (2);
  31. 4j9w (Na: 2) - Crystal Structure of the Complex of A Hydroxyproline Epimerase (Target Efi-506499, Pseudomonas Fluorescens Pf-5) with the Inhibitor Pyrrole- 2-Carboxylate
  32. 4j9x (Na: 2) - Crystal Structure of the Complex of A Hydroxyproline Epimerase (Target Efi-506499, Pseudomonas Fluorescens Pf-5) with Trans-4-Hydroxy-L- Proline
  33. 4jan (Na: 2) - Crystal Structure of Broadly Neutralizing Antibody CH103 in Complex with Hiv-1 GP120
  34. 4jb3 (Na: 1) - Crystal Structure of BT_0970, A Had Family Phosphatase From Bacteroides Thetaiotaomicron Vpi-5482, Target Efi-501083, with Bound Sodium and Glycerol, Closed Lid, Ordered Loop
  35. 4jci (Na: 1) - Crystal Structure of CSAL_2705, A Putative Hydroxyproline Epimerase From Chromohalobacter Salexigens (Target Efi-506486), Space Group P212121, Unliganded
  36. 4jcm (Na: 1) - Crystal Structure of Gamma-Cgtase From Alkalophilic Bacillus Clarkii at 1.65 Angstrom Resolution
    Other atoms: Cl (13); Ca (6);
  37. 4jco (Na: 26) - 1.7 A Resolution Structure of Wild Type Malate Dehydrogenase From Haloarcula Marismortui
    Other atoms: Cl (13);
  38. 4jd0 (Na: 8) - Structure of the Inositol-1-Phosphate Ctp Transferase From T. Maritima.
    Other atoms: As (1); Cl (1);
  39. 4jd5 (Na: 1) - Crystal Structure of Benzoylformate Decarboxylase Mutant L403E
    Other atoms: Ca (2);
  40. 4jdo (Na: 3) - Secreted Chlamydial Protein PGP3, Coiled-Coil Deletion
Page generated: Fri Dec 24 09:45:26 2021

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