Sodium in PDB 4j3g: Crystal Structure of Ribosomal-Protein-Alanine N-Acetyltransferase From Brucella Melitensis

The structure of Crystal Structure of Ribosomal-Protein-Alanine N-Acetyltransferase From Brucella Melitensis, PDB code: 4j3g was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	46.32 / 1.75
Space group	P 1
Cell size a, b, c (Å), α, β, γ (°)	39.110, 57.000, 73.420, 86.55, 88.15, 88.76
R / Rfree (%)	17.1 / 21.2

The binding sites of Sodium atom in the Crystal Structure of Ribosomal-Protein-Alanine N-Acetyltransferase From Brucella Melitensis (pdb code 4j3g). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total 2 binding sites of Sodium where determined in the Crystal Structure of Ribosomal-Protein-Alanine N-Acetyltransferase From Brucella Melitensis, PDB code: 4j3g:
Jump to Sodium binding site number: 1; 2;

Sodium binding site 1 out of 2 in the Crystal Structure of Ribosomal-Protein-Alanine N-Acetyltransferase From Brucella Melitensis


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of Ribosomal-Protein-Alanine N-Acetyltransferase From Brucella Melitensis within 5.0Å range: probe atom residue distance (Å) B Occ B:Na202 b:17.8 occ:1.00 O B:HOH427 2.0 33.7 1.0 OE2 B:GLU109 2.1 33.7 1.0 NE2 B:HIS7 2.3 23.9 1.0 O B:HOH373 2.3 30.0 1.0 O B:HOH397 2.7 39.8 1.0 CE1 B:HIS7 3.1 21.4 1.0 CD B:GLU109 3.2 30.1 1.0 CD2 B:HIS7 3.3 22.0 1.0 OE1 B:GLU109 3.7 33.4 1.0 O B:HOH395 4.2 37.7 1.0 ND1 B:HIS7 4.2 21.0 1.0 CG B:HIS7 4.3 20.7 1.0 CG B:GLU109 4.4 25.4 1.0 CD2 B:LEU56 4.6 16.8 1.0 NH2 B:ARG113 5.0 22.1 1.0

Sodium binding site 2 out of 2 in the Crystal Structure of Ribosomal-Protein-Alanine N-Acetyltransferase From Brucella Melitensis


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 2 of Crystal Structure of Ribosomal-Protein-Alanine N-Acetyltransferase From Brucella Melitensis within 5.0Å range: probe atom residue distance (Å) B Occ C:Na202 b:13.6 occ:1.00 OE2 C:GLU109 2.0 29.2 1.0 O C:HOH400 2.0 37.4 1.0 O C:HOH404 2.0 33.0 1.0 NE2 C:HIS7 2.2 21.1 1.0 O C:HOH405 2.3 31.6 1.0 N1 C:IMD203 2.8 53.3 1.0 CE1 C:HIS7 3.0 19.3 1.0 CD C:GLU109 3.1 26.8 1.0 CD2 C:HIS7 3.2 21.8 1.0 C2 C:IMD203 3.3 52.0 1.0 OE1 C:GLU109 3.6 26.4 1.0 C5 C:IMD203 4.0 55.4 1.0 ND1 C:HIS7 4.2 19.5 1.0 CG C:HIS7 4.3 19.4 1.0 CG C:GLU109 4.3 24.9 1.0 O C:HOH380 4.3 33.6 1.0 CD2 C:LEU56 4.5 19.7 1.0 N3 C:IMD203 4.6 53.6 1.0 O C:HOH437 4.6 40.7 1.0 NH2 C:ARG113 4.8 23.7 1.0 C4 C:IMD203 4.9 55.3 1.0

Seattle Structural Genomics Center For Infectious Disease(Ssgcid), J.Abendroth, B.Sankaran, J.W.Fairman, D.Lorimer, T.E.Edwards. Crystal Structure of Ribosomal-Protein-Alanine N-Acetyltransferase From Brucella Melitensis To Be Published.