Sodium in PDB, part 100 (files: 3961-4000),
PDB 4fpa-4gfi
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 3961-4000 (PDB 4fpa-4gfi).
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4fpa (Na: 4) - Crystal Structure of Recombinant Human Hexokinase Type I Mutant D413N Glucose 6-Phosphate
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4fpb (Na: 4) - Crystal Structure of Recombinant Human Hexokinase Type I with 1,5- Anhydroglucitol 6-Phosphate
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4fpv (Na: 2) - Crystal Structure of D. Rerio TDP2 Complexed with Single Strand Dna Product
Other atoms:
Mg (2);
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4fqf (Na: 4) - Crystal Structure of A Thionitrate Intermediate of Human Aldehyde Dehydrogenase-2
Other atoms:
Mg (4);
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4fqq (Na: 2) - Crystal Structure of Germline Antibody PGT121-Gl Fab
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4fr8 (Na: 8) - Crystal Structure of Human Aldehyde Dehydrogenase-2 in Complex with Nitroglycerin
Other atoms:
Mg (8);
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4fs1 (Na: 1) - Base Pairing Mechanism of N2,3-Ethenoguanine with Dttp By Human Polymerase Iota
Other atoms:
F (1);
Mg (3);
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4fs2 (Na: 1) - Base Pairing Mechanism of N2,3-Ethenoguanine with Dctp By Human Polymerase Iota
Other atoms:
F (1);
Mg (3);
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4fsk (Na: 1) - Urate Oxidase-Azide Complex in Anaerobic Conditions
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4ftw (Na: 1) - Crystal Structure of A Carboxyl Esterase N110C/L145H at 2.3 Angstrom Resolution
Other atoms:
Cl (1);
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4fud (Na: 1) - Crystal Structure of the Urokinase
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4fui (Na: 1) - Crystal Structure of the Urokinase
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4fus (Na: 2) - The X-Ray Structure of Hahella Chejuensis Family 48 Glycosyl Hydrolase
Other atoms:
Ca (1);
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4fw6 (Na: 1) - Crystal Structure of the Lpxc in Complex with N-[(2S,3R)-3-Hydroxy-1- (Hydroxyamino)-1-Oxobutan-2-Yl]-4-(Phenylethynyl)Benzamide Inhibitor
Other atoms:
Zn (4);
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4fx5 (Na: 1) - Von Willebrand Factor Type A From Catenulispora Acidiphila
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4fxl (Na: 1) - Crystal Structure of the D76N Beta-2 Microglobulin Mutant
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4fxq (Na: 2) - Full-Length Certhrax Toxin From Bacillus Cereus in Complex with Inhibitor P6
Other atoms:
F (2);
Cl (3);
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4fxz (Na: 2) - Crystal Structure of Leut-F253A Bound to L-Leucine From Lipid Bicelles
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4fy0 (Na: 2) - Crystal Structure of Leut-F253A Bound to L-Selenomethionine From Lipid Bicelles
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4fzx (Na: 4) - Exonuclease X in Complex with 3' Overhanging Duplex Dna
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4fzy (Na: 4) - Exonuclease X in Complex with 12BP Blunt-Ended Dsdna
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4fzz (Na: 4) - Exonuclease X in Complex with 5' Overhanging Duplex Dna
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4g0a (Na: 1) - Crystallographic Analysis of Rotavirus NSP2-Rna Complex Reveals Specific Recognition of 5'-Gg Sequence For Rtpase Activity
Other atoms:
Cl (4);
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4g0r (Na: 2) - Structural Characterization of H-1 Parvovirus: Comparison of Infectious Virions to Replication Defective Particles
Other atoms:
Mg (2);
Cl (1);
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4g1k (Na: 4) - Crystal Structure of Triosephosphate Isomerase From Burkholderia Thailandensis
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4g1m (Na: 1) - Re-Refinement of Alpha V Beta 3 Structure
Other atoms:
Ca (7);
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4g5h (Na: 1) - Crystal Structure of Capsular Polysaccharide Synthesizing Enzyme Cape From Staphylococcus Aureus in Complex with By-Product
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4g6z (Na: 1) - Crystal Structure of A Glutamyl-Trna Synthetase Glurs From Burkholderia Thailandensis Bound to L-Glutamate
Other atoms:
Cl (1);
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4g8j (Na: 3) - X-Ray Structure of Uridine Phosphorylease From Vibrio Cholerae Complexed with Thymidine at 2.12 A Resolution
Other atoms:
Mg (2);
Cl (9);
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4g8t (Na: 4) - Crystal Structure of A Glucarate Dehydratase Related Protein, From Actinobacillus Succinogenes, Target Efi-502312, with Sodium and Sulfate Bound, Ordered Loop
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4gaf (Na: 1) - Crystal Structure of Ebi-005, A Chimera of Human Il-1BETA and Il-1RA, Bound to Human Interleukin-1 Receptor Type 1
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4gbj (Na: 4) - Crystal Structure of Nad-Binding 6-Phosphogluconate Dehydrogenase From Dyadobacter Fermentans
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4gbt (Na: 1) - Structural Characterization of H-1 Parvovirus: Comparison of Infectious Virions to Replication Defective Particles
Other atoms:
Cl (1);
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4gbu (Na: 5) - OYE1-W116A in Complex with Aromatic Product of S-Carvone Dismutation
Other atoms:
Mg (2);
Cl (2);
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4gcv (Na: 11) - Structure of A Putative Transcription Factor (PA1374)From Pseudomonas Aeruginosa
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4gdk (Na: 2) - Crystal Structure of Human ATG12~ATG5 Conjugate in Complex with An N- Terminal Fragment of ATG16L1
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4gdl (Na: 1) - Crystal Structure of Human ATG12~ATG5 Conjugate in Complex with An N- Terminal Fragment of ATG16L1
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4gdx (Na: 1) - Crystal Structure of Human Gamma-Glutamyl Transpeptidase--Glutamate Complex
Other atoms:
Cl (2);
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4ge8 (Na: 4) - OYE1-W116I Complexed with (S)-Carvone
Other atoms:
Mg (1);
Cl (3);
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4gfi (Na: 4) - Crystal Structure of Efi-502318, An Enolase Family Member From Agrobacterium Tumefaciens with Homology to Dipeptide Epimerases (Bound Sodium, L-Ala-L-Glu with Ordered Loop)
Other atoms:
Cl (5);
Page generated: Thu Dec 28 11:18:50 2023
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