Atomistry » Sodium » PDB 4blw-4c44
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Sodium in PDB, part 93 (files: 3681-3720), PDB 4blw-4c44

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 3681-3720 (PDB 4blw-4c44).
  1. 4blw (Na: 2) - Crystal Structure of Escherichia Coli 23S Rrna (A2030-N6)- Methyltransferase Rlmj in Complex with S- Adenosylhomocysteine (Adohcy) and Adenosine Monophosphate ( Amp)
  2. 4bmb (Na: 1) - Crystal Structure of the N Terminal Domain of Human Galectin 8
    Other atoms: Zn (1);
  3. 4bn4 (Na: 1) - Structure of Human SIRT3 in Complex with Adp-Ribose
    Other atoms: Zn (1);
  4. 4boh (Na: 2) - Madanins (Merops I53) Are Cleaved By Thrombin and Factor Xa
  5. 4bow (Na: 1) - Crystal Structure of LAMA_E269S From Z. Galactanivorans in Complex with Laminaritriose and Laminaritetraose
    Other atoms: Ca (2);
  6. 4bqc (Na: 2) - Crystal Structure of the FN5 and FN6 Domains of NEO1 Bound to Sos
  7. 4bqp (Na: 1) - Mtb Inha Complex with Methyl-Thiazole Compound 7
    Other atoms: F (12);
  8. 4br6 (Na: 6) - Crystal Structure of Chaetomium Thermophilum Mnsod
    Other atoms: Mn (4);
  9. 4bre (Na: 1) - Legionella Pneumophila NTPDASE1 Crystal Form II (Closed) in Complex with Transition State Mimic Adenosine 5' Phosphovanadate
    Other atoms: Mg (2); V (2);
  10. 4brf (Na: 1) - Legionella Pneumophila NTPDASE1 Crystal Form II (Closed) in Complex with A Distorted Orthomolybdate Ion and Amp
    Other atoms: Mo (4); Mg (6); Cl (2);
  11. 4brg (Na: 1) - Legionella Pneumophila NTPDASE1 Crystal Form II (Closed) in Complex with Mg Gmppnp
    Other atoms: Mg (2); Cl (2);
  12. 4brs (Na: 3) - Structure of Wild Type PHAZ7 Phb Depolymerase
    Other atoms: Mg (1); Cl (1);
  13. 4bv3 (Na: 1) - Crystal Structure of SIRT3 in Complex with the Inhibitor Ex-527 and Nad
    Other atoms: Zn (1); Cl (2);
  14. 4bvh (Na: 1) - Crystal Structure of Human SIRT3 in Complex with the Inhibitor Ex-527 and 2'-O-Acetyl-Adp-Ribose
    Other atoms: Zn (3); Cl (5);
  15. 4bvj (Na: 3) - Structure of Y105A Mutant of PHAZ7 Phb Depolymerase
  16. 4bvn (Na: 2) - Ultra-Thermostable BETA1-Adrenoceptor with Cyanopindolol Bound
  17. 4bvo (Na: 2) - Legionella Pneumophila NTPDASE1 Crystal Form VI (Part-Open) in Complex with Polytungstate Pom-1
    Other atoms: W (12);
  18. 4bvp (Na: 1) - Legionella Pneumophila NTPDASE1 Crystal Form II (Closed) in Complex with Heptamolybdate and Octamolybdate
    Other atoms: Mo (46); Mg (5); Cl (2);
  19. 4bxw (Na: 1) - Crystal Structure of the Prothrombinase Complex From the Venom of Pseudonaja Textilis
  20. 4by4 (Na: 1) - Crystal Structure of Drosophila FRQ2
    Other atoms: Ca (6);
  21. 4by5 (Na: 1) - Crystal Structure of Drosophila FRQ2
    Other atoms: Ca (12);
  22. 4bym (Na: 2) - Structure of PHAZ7 Phb Depolymerase Y105E Mutant
    Other atoms: Cl (1);
  23. 4bz1 (Na: 4) - Structure of Dengue Virus Ediii in Complex with Fab 3E31
    Other atoms: Zn (1); Cl (2);
  24. 4bz2 (Na: 8) - Structure of Dengue Virus Ediii in Complex with Fab 2D73
    Other atoms: Cl (3);
  25. 4bz3 (Na: 2) - Crystal Structure of the Metallo-Beta-Lactamase Vim-2
    Other atoms: Zn (6);
  26. 4c0j (Na: 1) - Crystal Structure of Drosophila Miro Ef Hand and Cgtpase Domains in the Apo State (Apo-Miros)
  27. 4c0k (Na: 1) - Crystal Structure of Drosophila Miro Ef Hand and Cgtpase Domains Bound to One Calcium Ion (Ca-Miros)
    Other atoms: Ca (1);
  28. 4c0l (Na: 1) - Crystal Structure of Drosophila Miro Ef Hand and Cgtpase Domains Bound to One Magnesium Ion and Mg:Gdp (Mggdp-Miros)
    Other atoms: Mg (2);
  29. 4c10 (Na: 6) - Cryo-Em Reconstruction of Empty Enterovirus 71 in Complex with A Neutralizing Antibody E19
    Other atoms: Cl (1);
  30. 4c1d (Na: 2) - Crystal Structure of the Metallo-Beta-Lactamase Vim-2 with L-Captopril
    Other atoms: Zn (6);
  31. 4c1e (Na: 2) - Crystal Structure of the Metallo-Beta-Lactamase Vim-2 with D-Captopril
    Other atoms: Zn (6);
  32. 4c1o (Na: 1) - Geobacillus Thermoglucosidasius Gh Family 52 Xylosidase
  33. 4c1p (Na: 1) - Geobacillus Thermoglucosidasius Gh Family 52 Xylosidase
  34. 4c2u (Na: 2) - Crystal Structure of Deinococcus Radiodurans Uvrd in Complex with Dna, Form 1
    Other atoms: Mg (2);
  35. 4c3u (Na: 1) - Extensive Counter-Ion Interactions with Subtilisin in Aqueous Medium, Cs Derivative
    Other atoms: Cs (10); Ca (1); Cl (6);
  36. 4c3v (Na: 3) - Extensive Counter-Ion Interactions with Subtilisin in Aqueous Medium, No Cs Soak
    Other atoms: Ca (1);
  37. 4c3w (Na: 1) - Vanadium(IV)-Picolinate Complexed with Lysozyme
    Other atoms: Cl (2); V (1);
  38. 4c3x (Na: 4) - Crystal Structure of 3-Ketosteroid DELTA1-Dehydrogenase From Rhodococcus Erythropolis SQ1
    Other atoms: Cl (8);
  39. 4c3y (Na: 4) - Crystal Structure of 3-Ketosteroid DELTA1-Dehydrogenase From Rhodococcus Erythropolis SQ1 in Complex with 1,4- Androstadiene-3,17-Dione
  40. 4c44 (Na: 1) - Crystal Structure of Truncated Plant Hemoglobin From Arabidopsis Thaliana
    Other atoms: Fe (1);
Page generated: Fri Dec 24 09:44:27 2021

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