Sodium in PDB, part 275 (files: 10961-11000),
PDB 8icm-8pft
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 10961-11000 (PDB 8icm-8pft).
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8icm (Na: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Seven Base Pairs of Dna; Soaked in the Presence of Datp (1 Millimolar), MNCL2 (5 Millimolar), and Ammonium Sulfate (75 Millimolar)
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8icn (Na: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Seven Base Pairs of Dna; Soaked in the Presence of Atp (1 Millimolar) and MNCL2 (5 Millimolar)
Other atoms:
Mn (1);
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8ico (Na: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Seven Base Pairs of Dna; Soaked in the Presence of Azt-Tp (1 Millimolar) and MNCL2 (5 Millimolar)
Other atoms:
Mn (2);
-
8icp (Na: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Seven Base Pairs of Dna; Soaked in the Presence of Datp (1 Millimolar) and MNCL2 (5 Millimolar)
Other atoms:
Mn (1);
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8icq (Na: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Seven Base Pairs of Dna; Soaked in the Presence of of Datp (0.1 Millimolar) and MNCL2 (0.5 Millimolar)
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8icr (Na: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Seven Base Pairs of Dna; Soaked in the Presence of Datp (1 Millimolar) and MNCL2 (5 Millimolar)
Other atoms:
Mn (2);
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8ics (Na: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Seven Base Pairs of Dna; Soaked in the Presence of Dctp (1 Millimolar) and MNCL2 (5 Millimolar)
Other atoms:
Mn (2);
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8ict (Na: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Seven Base Pairs of Dna; Soaked in the Presence of Dctp (1 Millimolar) and MNCL2 (5 Millimolar)
Other atoms:
Mn (2);
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8icu (Na: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Seven Base Pairs of Dna; Soaked in the Presence of Ddatp (1 Millimolar) and MNCL2 (5 Millimolar)
Other atoms:
Mn (2);
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8icv (Na: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Seven Base Pairs of Dna; Soaked in the Presence of Dgtp (1 Millimolar) and MNCL2 (5 Millimolar)
Other atoms:
Mn (1);
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8icw (Na: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Seven Base Pairs of Dna; Soaked in the Presence of Dttp (1 Millimolar) and MNCL2 (5 Millimolar)
Other atoms:
Mn (1);
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8icx (Na: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Seven Base Pairs of Dna; Soaked in the Presence of Dttp (1 Millimolar) and MNCL2 (5 Millimolar)
Other atoms:
Mn (2);
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8icy (Na: 2) - Dna Polymerase Beta (E.C.2.7.7.7)/Dna Complex + Thymidine- 5'-Triphosphate, Soaked in the Presence of Dttp and MNCL2
Other atoms:
Mn (1);
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8icz (Na: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Seven Base Pairs of Dna; Soaked in the Presence of of Datp (1 Millimolar), MNCL2 (5 Millimolar), and Lithium Sulfate (75 Millimolar)
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8ijn (Na: 2) - Bovine Heart Cytochrome C Oxidase in the Nitric Oxide-Bound Fully Reduced State at 100 K
Other atoms:
Zn (2);
Mg (2);
Fe (4);
Cu (6);
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8ing (Na: 2) - Structure of the Ternary Complex of Lactoperoxidase with Substrate Nitric Oxide (No) and Product Nitrite Ion (NO2) at 1.98 A Resolution
Other atoms:
Ca (1);
I (13);
Fe (1);
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8iu9 (Na: 1) - Crystal Structure of GH66 Endodextranase From Flavobacterium Johnsoniae in Complex with Glucose
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8iua (Na: 1) - Crystal Structure of GH66 Endodextranase From Flavobacterium Johnsoniae in Complex with Isomaltose
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8iub (Na: 3) - Crystal Structure of GH66 Endodextranase From Flavobacterium Johnsoniae in Complex with Isomaltotriose
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8j0u (Na: 1) - Crystal Structure of Horse Spleen L-Ferritin A115T Mutant at -180DEG Celsius.
Other atoms:
Cl (1);
Cd (9);
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8j5a (Na: 1) - Single-Particle Cryo-Em Structure of Mouse Apoferritin at 1.19 Angstrom Resolution (Dataset A)
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8jfs (Na: 3) - Phosphate Bound Acylphosphatase From Deinococcus Radiodurans at 1 Angstrom Resolution
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8kme (Na: 2) - Crystal Structure of Human Alpha-Thrombin Inhibited with SEL2770.
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8oep (Na: 1) - Crystal Structure of the PTPN3 Pdz Domain Bound to the HPV18 E6 Oncoprotein C-Terminal Peptide
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8ofd (Na: 1) - Crystal Structure of Beta-Conglutin From Lupinus Albus Refined to 2.81 A
Other atoms:
K (1);
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8ojt (Na: 1) - Crystal Structure of the Human Igd Fab - Structure FAB2
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8oju (Na: 2) - Crystal Structure of the Human Igd Fab - Structure FAB3
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8okk (Na: 3) - Crystal Structure of F2F-2020184-00X Bound to the Main Protease (3CLPRO/Mpro) of Sars-Cov-2.
Other atoms:
Cl (2);
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8okl (Na: 2) - Crystal Structure of F2F-2020185-01X Bound to the Main Protease (3CLPRO/Mpro) of Sars-Cov-2.
Other atoms:
Cl (2);
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8okm (Na: 1) - Crystal Structure of F2F-2020197-00X Bound to the Main Protease (3CLPRO/Mpro) of Sars-Cov-2.
Other atoms:
Cl (4);
Br (2);
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8okn (Na: 3) - Crystal Structure of F2F-2020198-00X Bound to the Main Protease (3CLPRO/Mpro) of Sars-Cov-2.
Other atoms:
Cl (2);
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8otb (Na: 1) - Clostridium Perfringens Chitinase CP4_3455
Other atoms:
Cl (2);
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8ovr (Na: 2) - Clostridium Perfringens Chitinase CP56_3454 Apo Form
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8owa (Na: 1) - Sr Ca(2+)-Atpase in the E2 State Complexed with the Photoswitch- Thapsigargin Derivative Aztg-4
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8owl (Na: 1) - Sr Ca(2+)-Atpase in the E2 State Complexed with the Photoswitch- Thapsigargin Derivative Aztg-6
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8oyf (Na: 2) - Crystal Structure of Asbtnm in Lipidic Cubic Phase Without Substrate Bound
Other atoms:
Ni (1);
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8oyg (Na: 2) - Crystal Structure of Asbtnm in Complex with Pantoate
Other atoms:
Cd (2);
-
8p3m (Na: 2) - The Structure of Thiocyanate Dehydrogenase Mutant Form with Lys 281 Replaced By Ala From Thioalkalivibrio Paradoxus
Other atoms:
Cu (32);
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8pe9 (Na: 1) - Complex Between DDR1 Ds-Like Domain and Prth-101 Fab
Other atoms:
Ca (1);
Zn (3);
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8pft (Na: 1) - X-Ray Structure of the Adduct Formed Upon Reaction of Lysozyme with K2[RU2(D-P-Fphf)(CO3)3] in Condition A
Other atoms:
F (4);
Cl (1);
Ru (4);
Page generated: Fri Jul 28 12:35:46 2023
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