Sodium in PDB 8crn: Streptavidin S112Y Co-Taml Artificial Metalloenzyme

The structure of Streptavidin S112Y Co-Taml Artificial Metalloenzyme, PDB code: 8crn was solved by N.V.Igareta, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	45.96 / 2.00
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	192.51, 57.615, 57.615, 90, 107.42, 90
R / Rfree (%)	18.7 / 20.8

The structure of Streptavidin S112Y Co-Taml Artificial Metalloenzyme also contains other interesting chemical elements:

Cobalt

(Co)

4 atoms

The binding sites of Sodium atom in the Streptavidin S112Y Co-Taml Artificial Metalloenzyme (pdb code 8crn). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Streptavidin S112Y Co-Taml Artificial Metalloenzyme, PDB code: 8crn:

Sodium binding site 1 out of 1 in the Streptavidin S112Y Co-Taml Artificial Metalloenzyme


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Streptavidin S112Y Co-Taml Artificial Metalloenzyme within 5.0Å range: probe atom residue distance (Å) B Occ A:Na202 b:37.6 occ:1.00 OG1 D:THR76 2.6 26.0 1.0 OG1 A:THR76 2.6 30.3 1.0 HA2 D:GLY58 2.9 24.9 1.0 HA2 A:GLY58 2.9 26.5 1.0 O A:THR57 2.9 26.1 1.0 O D:THR57 2.9 26.7 1.0 HA A:TRP75 2.9 25.1 1.0 HA D:TRP75 2.9 24.0 1.0 HB A:THR76 3.0 28.6 1.0 HB D:THR76 3.0 27.4 1.0 H D:THR76 3.0 25.0 1.0 H A:THR76 3.1 25.3 1.0 N D:THR76 3.2 24.1 1.0 HG1 D:THR76 3.2 25.4 0.0 HG1 A:THR76 3.2 30.0 0.0 N A:THR76 3.2 24.4 1.0 CB A:THR76 3.2 28.1 1.0 CB D:THR76 3.3 28.1 1.0 C D:TRP75 3.6 24.2 1.0 C A:TRP75 3.6 25.5 1.0 CA D:TRP75 3.7 23.2 1.0 CA A:TRP75 3.7 24.4 1.0 CA D:GLY58 3.8 24.6 1.0 CA A:GLY58 3.8 25.4 1.0 CA A:THR76 3.8 27.2 1.0 CA D:THR76 3.8 27.8 1.0 C A:THR57 3.9 27.4 1.0 C D:THR57 3.9 27.3 1.0 HG22 A:THR57 3.9 35.1 1.0 HA3 D:GLY58 4.0 24.9 1.0 HG22 D:THR57 4.0 34.8 1.0 HA3 A:GLY58 4.0 26.5 1.0 HG23 A:THR57 4.2 35.1 1.0 HG23 D:THR57 4.2 34.8 1.0 N D:GLY58 4.3 26.5 1.0 N A:GLY58 4.3 29.7 1.0 HA D:THR76 4.4 26.8 1.0 HA A:THR76 4.4 26.3 1.0 O D:TRP75 4.4 22.1 1.0 O A:TRP75 4.4 23.6 1.0 N D:TRP75 4.5 23.5 1.0 CG2 A:THR57 4.5 34.8 1.0 N A:TRP75 4.5 25.1 1.0 HB2 A:TRP75 4.6 25.9 1.0 CG2 D:THR57 4.6 35.4 1.0 CG2 A:THR76 4.6 29.7 1.0 HB2 D:TRP75 4.6 25.5 1.0 CG2 D:THR76 4.6 27.1 1.0 HG21 A:THR76 4.6 29.1 1.0 HG21 D:THR76 4.6 27.4 1.0 O D:GLY74 4.7 27.1 1.0 CB A:TRP75 4.8 26.4 1.0 O A:GLY74 4.8 26.0 1.0 CB D:TRP75 4.8 25.8 1.0 H A:THR57 4.8 29.9 1.0 H D:THR57 4.8 30.1 1.0 C D:GLY74 4.8 24.2 1.0 C A:GLY74 4.9 24.6 1.0 C D:GLY58 4.9 23.9 1.0 C A:GLY58 4.9 26.1 1.0 C A:THR76 4.9 24.4 1.0 C D:THR76 4.9 26.2 1.0 O A:THR76 5.0 28.4 1.0 O D:THR76 5.0 29.1 1.0 H D:TRP75 5.0 23.6 1.0 H D:ARG59 5.0 26.5 1.0

N.V.Igareta, N.V.Igareta. N/A N/A.